Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 SCARNA21-201ENST00000517026 139 ntBASIC17.48■□□□□ 0.39
CTR9Q6PD62 AC022217.1-201ENST00000521069 738 ntBASIC17.48■□□□□ 0.39
CTR9Q6PD62 AC009884.2-201ENST00000603110 324 ntBASIC17.48■□□□□ 0.39
CTR9Q6PD62 AL645939.5-201ENST00000606834 243 ntBASIC17.48■□□□□ 0.39
CTR9Q6PD62 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 FAM90A7P-201ENST00000382628 1395 ntBASIC17.48■□□□□ 0.39
CTR9Q6PD62 FAM90A23P-201ENST00000400136 1395 ntBASIC17.48■□□□□ 0.39
CTR9Q6PD62 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 AL354702.1-201ENST00000442006 1960 ntBASIC17.48■□□□□ 0.39
CTR9Q6PD62 TUBBP5-203ENST00000508529 1334 ntBASIC17.47■□□□□ 0.39
CTR9Q6PD62 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.47■□□□□ 0.39
CTR9Q6PD62 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 AP000346.4-201ENST00000614827 381 ntBASIC17.47■□□□□ 0.39
CTR9Q6PD62 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.47■□□□□ 0.39
CTR9Q6PD62 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTR9Q6PD62 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 KHSRPP1-201ENST00000427983 1768 ntBASIC17.46■□□□□ 0.39
CTR9Q6PD62 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 CYP4F23P-201ENST00000593402 1579 ntBASIC17.46■□□□□ 0.39
CTR9Q6PD62 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 BCYRN1-201ENST00000418539 200 ntBASIC17.46■□□□□ 0.39
CTR9Q6PD62 AC005077.2-201ENST00000449786 690 ntBASIC17.46■□□□□ 0.39
CTR9Q6PD62 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 AC106794.1-201ENST00000506935 792 ntBASIC17.46■□□□□ 0.39
CTR9Q6PD62 MARK2P5-201ENST00000507649 634 ntBASIC17.46■□□□□ 0.39
CTR9Q6PD62 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.46■□□□□ 0.39
CTR9Q6PD62 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 AC008805.1-201ENST00000590892 364 ntBASIC17.46■□□□□ 0.39
CTR9Q6PD62 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.46■□□□□ 0.39
CTR9Q6PD62 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTR9Q6PD62 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms