Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 AL008638.5-201ENST00000623814 1298 ntBASIC15.53■□□□□ 0.08
RNF43Q68DV7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 AC055811.4-201ENST00000624039 1754 ntBASIC15.53■□□□□ 0.08
RNF43Q68DV7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.53■□□□□ 0.08
RNF43Q68DV7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.53■□□□□ 0.08
RNF43Q68DV7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 OR2I1P-209ENST00000641730 5365 ntBASIC15.52■□□□□ 0.08
RNF43Q68DV7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 CLUHP2-201ENST00000426660 1303 ntBASIC15.52■□□□□ 0.08
RNF43Q68DV7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 FXNP2-201ENST00000411625 547 ntBASIC15.52■□□□□ 0.08
RNF43Q68DV7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 SCARNA20.5-201ENST00000516991 142 ntBASIC15.52■□□□□ 0.08
RNF43Q68DV7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF43Q68DV7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 AC106820.3-201ENST00000561653 397 ntBASIC15.52■□□□□ 0.08
RNF43Q68DV7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 AC138466.3-201ENST00000619983 221 ntBASIC15.52■□□□□ 0.08
RNF43Q68DV7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF43Q68DV7 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF43Q68DV7 AC113367.3-201ENST00000508316 1912 ntBASIC15.52■□□□□ 0.07
RNF43Q68DV7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
RNF43Q68DV7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
RNF43Q68DV7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF43Q68DV7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
RNF43Q68DV7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.52■□□□□ 0.07
RNF43Q68DV7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RNF43Q68DV7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.52■□□□□ 0.07
RNF43Q68DV7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF43Q68DV7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF43Q68DV7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
RNF43Q68DV7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 AC097359.2-201ENST00000604992 2389 ntBASIC15.51■□□□□ 0.07
RNF43Q68DV7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms