Protein–RNA interactions for Protein: Q08E93

FAM27E3, Protein FAM27E3, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27E3Q08E93 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 XBP1P1-201ENST00000436573 652 ntBASIC12.79□□□□□ -0.36
FAM27E3Q08E93 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 MIR4754-201ENST00000582477 89 ntBASIC12.79□□□□□ -0.36
FAM27E3Q08E93 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 AC015688.4-201ENST00000580780 1647 ntBASIC12.79□□□□□ -0.36
FAM27E3Q08E93 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 AC023157.3-201ENST00000619086 2088 ntBASIC12.79□□□□□ -0.36
FAM27E3Q08E93 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 AC009093.10-201ENST00000641956 1442 ntBASIC12.79□□□□□ -0.36
FAM27E3Q08E93 AC092384.3-202ENST00000564646 2873 ntBASIC12.79□□□□□ -0.36
FAM27E3Q08E93 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM27E3Q08E93 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AJ011931.1-201ENST00000618749 2492 ntBASIC12.78□□□□□ -0.36
FAM27E3Q08E93 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AC008723.1-201ENST00000506922 207 ntBASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AC026803.1-201ENST00000569130 274 ntBASIC12.78□□□□□ -0.36
FAM27E3Q08E93 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AL109837.1-201ENST00000603272 613 ntBASIC12.78□□□□□ -0.36
FAM27E3Q08E93 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 MIR6769A-201ENST00000617340 73 ntBASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AC007718.1-201ENST00000621078 280 ntBASIC12.78□□□□□ -0.36
FAM27E3Q08E93 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 FRMPD2B-201ENST00000431305 1347 ntBASIC12.78□□□□□ -0.36
FAM27E3Q08E93 AC015909.3-201ENST00000572855 1794 ntBASIC12.78□□□□□ -0.36
FAM27E3Q08E93 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FAM27E3Q08E93 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms