Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ASIC1P78348 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.49■□□□□ 0.23
ASIC1P78348 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ASIC1P78348 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.49■□□□□ 0.23
ASIC1P78348 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ASIC1P78348 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ASIC1P78348 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ASIC1P78348 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.49■□□□□ 0.23
ASIC1P78348 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ASIC1P78348 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ASIC1P78348 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.49■□□□□ 0.23
ASIC1P78348 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.48■□□□□ 0.23
ASIC1P78348 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.48■□□□□ 0.23
ASIC1P78348 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.48■□□□□ 0.23
ASIC1P78348 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.48■□□□□ 0.23
ASIC1P78348 AC006504.5-208ENST00000588784 2401 ntBASIC16.48■□□□□ 0.23
ASIC1P78348 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ASIC1P78348 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ASIC1P78348 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
ASIC1P78348 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ASIC1P78348 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ASIC1P78348 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
ASIC1P78348 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
ASIC1P78348 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.48■□□□□ 0.23
ASIC1P78348 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ASIC1P78348 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ASIC1P78348 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.48■□□□□ 0.23
ASIC1P78348 AC244107.1-201ENST00000442033 332 ntBASIC16.48■□□□□ 0.23
ASIC1P78348 AC007551.1-201ENST00000457394 519 ntBASIC16.48■□□□□ 0.23
ASIC1P78348 KRT90P-201ENST00000549264 1064 ntBASIC16.48■□□□□ 0.23
ASIC1P78348 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.48■□□□□ 0.23
ASIC1P78348 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.48■□□□□ 0.23
ASIC1P78348 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.48■□□□□ 0.23
ASIC1P78348 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.48■□□□□ 0.23
ASIC1P78348 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.48■□□□□ 0.23
ASIC1P78348 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.48■□□□□ 0.23
ASIC1P78348 AP001002.3-201ENST00000623482 206 ntBASIC16.48■□□□□ 0.23
ASIC1P78348 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ASIC1P78348 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 AL354989.2-201ENST00000435838 1540 ntBASIC16.48■□□□□ 0.23
ASIC1P78348 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
ASIC1P78348 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ASIC1P78348 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ASIC1P78348 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.47■□□□□ 0.23
ASIC1P78348 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ASIC1P78348 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.47■□□□□ 0.23
ASIC1P78348 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 AC215219.1-201ENST00000400706 1817 ntBASIC16.47■□□□□ 0.23
ASIC1P78348 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.47■□□□□ 0.23
ASIC1P78348 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.47■□□□□ 0.23
ASIC1P78348 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 RN7SL832P-201ENST00000607781 1756 ntBASIC16.47■□□□□ 0.23
ASIC1P78348 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.47■□□□□ 0.23
ASIC1P78348 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ASIC1P78348 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.47■□□□□ 0.23
ASIC1P78348 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
ASIC1P78348 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.47■□□□□ 0.23
ASIC1P78348 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 BX088702.1-201ENST00000610784 235 ntBASIC16.47■□□□□ 0.23
ASIC1P78348 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 AC139712.1-201ENST00000378256 1875 ntBASIC16.47■□□□□ 0.23
ASIC1P78348 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
ASIC1P78348 GRK6P1-201ENST00000400595 1711 ntBASIC16.47■□□□□ 0.23
ASIC1P78348 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms