Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 AC016397.2-201ENST00000624848 1985 ntBASIC12.89□□□□□ -0.35
HIST1H3AP68431 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 AL136309.1-201ENST00000403917 691 ntBASIC12.89□□□□□ -0.35
HIST1H3AP68431 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 COX5BP1-201ENST00000507622 393 ntBASIC12.89□□□□□ -0.35
HIST1H3AP68431 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 MIR4683-201ENST00000579659 81 ntBASIC12.89□□□□□ -0.35
HIST1H3AP68431 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 AC138951.2-201ENST00000623455 1161 ntBASIC12.89□□□□□ -0.35
HIST1H3AP68431 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.88□□□□□ -0.35
HIST1H3AP68431 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 KRT43P-201ENST00000434019 910 ntBASIC12.88□□□□□ -0.35
HIST1H3AP68431 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 KRT8P28-201ENST00000433288 1390 ntBASIC12.88□□□□□ -0.35
HIST1H3AP68431 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms