Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
YBX1P67809 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
YBX1P67809 AC004945.1-201ENST00000416738 983 ntBASIC14.37□□□□□ -0.11
YBX1P67809 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.37□□□□□ -0.11
YBX1P67809 CNN2P10-201ENST00000443067 918 ntBASIC14.37□□□□□ -0.11
YBX1P67809 TPT1P11-201ENST00000458482 498 ntBASIC14.37□□□□□ -0.11
YBX1P67809 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.37□□□□□ -0.11
YBX1P67809 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.37□□□□□ -0.11
YBX1P67809 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.37□□□□□ -0.11
YBX1P67809 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.37□□□□□ -0.11
YBX1P67809 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
YBX1P67809 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 MIR4741-201ENST00000579822 90 ntBASIC14.37□□□□□ -0.11
YBX1P67809 RN7SL713P-201ENST00000582127 302 ntBASIC14.37□□□□□ -0.11
YBX1P67809 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 MIR6752-201ENST00000618442 71 ntBASIC14.37□□□□□ -0.11
YBX1P67809 AC009542.2-202ENST00000619004 1067 ntBASIC14.37□□□□□ -0.11
YBX1P67809 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
YBX1P67809 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
YBX1P67809 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.37□□□□□ -0.11
YBX1P67809 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.36□□□□□ -0.11
YBX1P67809 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 AC016397.2-201ENST00000624848 1985 ntBASIC14.36□□□□□ -0.11
YBX1P67809 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
YBX1P67809 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
YBX1P67809 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
YBX1P67809 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
YBX1P67809 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
YBX1P67809 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
YBX1P67809 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.36□□□□□ -0.11
YBX1P67809 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.36□□□□□ -0.11
YBX1P67809 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.36□□□□□ -0.11
YBX1P67809 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.36□□□□□ -0.11
YBX1P67809 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.36□□□□□ -0.11
YBX1P67809 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.36□□□□□ -0.11
YBX1P67809 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.36□□□□□ -0.11
YBX1P67809 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.36□□□□□ -0.11
YBX1P67809 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
YBX1P67809 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
YBX1P67809 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
YBX1P67809 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.36□□□□□ -0.11
YBX1P67809 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.36□□□□□ -0.11
YBX1P67809 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.36□□□□□ -0.11
YBX1P67809 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YBX1P67809 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms