Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 AC087388.1-201ENST00000571370 1112 ntBASIC13.27□□□□□ -0.29
VBP1P61758 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.27□□□□□ -0.29
VBP1P61758 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VBP1P61758 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VBP1P61758 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
VBP1P61758 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.27□□□□□ -0.29
VBP1P61758 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.27□□□□□ -0.29
VBP1P61758 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
VBP1P61758 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
VBP1P61758 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.27□□□□□ -0.29
VBP1P61758 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.27□□□□□ -0.29
VBP1P61758 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
VBP1P61758 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VBP1P61758 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.27□□□□□ -0.29
VBP1P61758 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.27□□□□□ -0.29
VBP1P61758 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
VBP1P61758 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.26□□□□□ -0.29
VBP1P61758 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
VBP1P61758 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
VBP1P61758 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
VBP1P61758 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.26□□□□□ -0.29
VBP1P61758 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.26□□□□□ -0.29
VBP1P61758 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.26□□□□□ -0.29
VBP1P61758 MIR3652-201ENST00000579335 131 ntBASIC13.26□□□□□ -0.29
VBP1P61758 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.26□□□□□ -0.29
VBP1P61758 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.26□□□□□ -0.29
VBP1P61758 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.26□□□□□ -0.29
VBP1P61758 AC068137.2-201ENST00000605408 478 ntBASIC13.26□□□□□ -0.29
VBP1P61758 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
VBP1P61758 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VBP1P61758 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
VBP1P61758 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
VBP1P61758 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.25□□□□□ -0.29
VBP1P61758 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.25□□□□□ -0.29
VBP1P61758 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.25□□□□□ -0.29
VBP1P61758 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
VBP1P61758 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VBP1P61758 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.25□□□□□ -0.29
VBP1P61758 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
VBP1P61758 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VBP1P61758 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.25□□□□□ -0.29
VBP1P61758 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VBP1P61758 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.25□□□□□ -0.29
VBP1P61758 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.25□□□□□ -0.29
VBP1P61758 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
VBP1P61758 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
VBP1P61758 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VBP1P61758 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
VBP1P61758 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms