Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.21□□□□□ -0.29
CLDN17P56750 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN17P56750 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN17P56750 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CLDN17P56750 AC079316.1-201ENST00000548397 411 ntBASIC13.21□□□□□ -0.29
CLDN17P56750 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN17P56750 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.21□□□□□ -0.29
CLDN17P56750 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN17P56750 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN17P56750 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN17P56750 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN17P56750 AC002472.3-201ENST00000640124 621 ntBASIC13.21□□□□□ -0.29
CLDN17P56750 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN17P56750 AC023908.3-201ENST00000564211 3047 ntBASIC13.21□□□□□ -0.29
CLDN17P56750 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN17P56750 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CLDN17P56750 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN17P56750 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN17P56750 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN17P56750 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.21□□□□□ -0.3
CLDN17P56750 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.21□□□□□ -0.3
CLDN17P56750 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CLDN17P56750 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CLDN17P56750 SNX18-202ENST00000343017 3140 ntBASIC13.21□□□□□ -0.3
CLDN17P56750 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN17P56750 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN17P56750 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN17P56750 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN17P56750 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.21□□□□□ -0.3
CLDN17P56750 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN17P56750 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CLDN17P56750 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN17P56750 AC015688.4-201ENST00000580780 1647 ntBASIC13.21□□□□□ -0.3
CLDN17P56750 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 AGGF1P1-201ENST00000509500 2073 ntBASIC13.2□□□□□ -0.3
CLDN17P56750 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN17P56750 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CLDN17P56750 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLDN17P56750 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CLDN17P56750 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLDN17P56750 AC026954.1-201ENST00000429771 1293 ntBASIC13.2□□□□□ -0.3
CLDN17P56750 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 TPT1P11-201ENST00000458482 498 ntBASIC13.2□□□□□ -0.3
CLDN17P56750 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN17P56750 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN17P56750 SNX29P1-201ENST00000548357 1007 ntBASIC13.2□□□□□ -0.3
CLDN17P56750 AC023310.1-201ENST00000554836 735 ntBASIC13.2□□□□□ -0.3
CLDN17P56750 MIR4683-201ENST00000579659 81 ntBASIC13.2□□□□□ -0.3
CLDN17P56750 AC073413.1-201ENST00000603927 732 ntBASIC13.2□□□□□ -0.3
CLDN17P56750 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CLDN17P56750 MIR6775-201ENST00000617557 69 ntBASIC13.2□□□□□ -0.3
CLDN17P56750 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN17P56750 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 KRT8P4-201ENST00000509735 1454 ntBASIC13.2□□□□□ -0.3
CLDN17P56750 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLDN17P56750 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLDN17P56750 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CLDN17P56750 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN17P56750 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
CLDN17P56750 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN17P56750 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN17P56750 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CLDN17P56750 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN17P56750 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN17P56750 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN17P56750 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN17P56750 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN17P56750 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLDN17P56750 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN17P56750 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN17P56750 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN17P56750 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CLDN17P56750 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN17P56750 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CLDN17P56750 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN17P56750 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms