Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.02■□□□□ -0
CDH4P55283 AC138649.2-201ENST00000615886 705 ntBASIC15.02■□□□□ -0
CDH4P55283 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CDH4P55283 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
CDH4P55283 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.02□□□□□ -0.01
CDH4P55283 INTS4P1-203ENST00000641008 3683 ntBASIC15.02□□□□□ -0.01
CDH4P55283 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH4P55283 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
CDH4P55283 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDH4P55283 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
CDH4P55283 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH4P55283 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.02□□□□□ -0.01
CDH4P55283 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CDH4P55283 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH4P55283 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
CDH4P55283 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CDH4P55283 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CDH4P55283 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDH4P55283 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH4P55283 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.02□□□□□ -0.01
CDH4P55283 OR2I1P-209ENST00000641730 5365 ntBASIC15.02□□□□□ -0.01
CDH4P55283 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH4P55283 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDH4P55283 AC140479.7-201ENST00000636301 2332 ntBASIC15.01□□□□□ -0.01
CDH4P55283 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH4P55283 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH4P55283 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH4P55283 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH4P55283 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 FAM90A7P-201ENST00000382628 1395 ntBASIC15.01□□□□□ -0.01
CDH4P55283 FAM90A23P-201ENST00000400136 1395 ntBASIC15.01□□□□□ -0.01
CDH4P55283 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDH4P55283 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH4P55283 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH4P55283 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDH4P55283 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDH4P55283 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH4P55283 SORD2P-201ENST00000558556 1069 ntBASIC15.01□□□□□ -0.01
CDH4P55283 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH4P55283 SNORD3B-2-202ENST00000571722 791 ntBASIC15.01□□□□□ -0.01
CDH4P55283 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH4P55283 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH4P55283 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH4P55283 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH4P55283 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH4P55283 AC133540.1-201ENST00000620845 1019 ntBASIC15.01□□□□□ -0.01
CDH4P55283 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH4P55283 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH4P55283 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
CDH4P55283 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 AC106881.1-201ENST00000605849 3329 ntBASIC15.01□□□□□ -0.01
CDH4P55283 LINC02228-204ENST00000642115 2962 ntBASIC15.01□□□□□ -0.01
CDH4P55283 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH4P55283 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 AC215219.1-201ENST00000400706 1817 ntBASIC15.01□□□□□ -0.01
CDH4P55283 AC138028.6-201ENST00000616106 1482 ntBASIC15.01□□□□□ -0.01
CDH4P55283 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH4P55283 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15□□□□□ -0.01
CDH4P55283 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15□□□□□ -0.01
CDH4P55283 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CDH4P55283 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 AC136759.1-202ENST00000530858 2194 ntBASIC15□□□□□ -0.01
CDH4P55283 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CDH4P55283 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15□□□□□ -0.01
CDH4P55283 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms