Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 KRT8P22-201ENST00000562317 1415 ntBASIC12.88□□□□□ -0.35
ATP1B3P54709 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ATP1B3P54709 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ATP1B3P54709 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ATP1B3P54709 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ATP1B3P54709 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.88□□□□□ -0.35
ATP1B3P54709 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.88□□□□□ -0.35
ATP1B3P54709 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 INGX-202ENST00000489074 768 ntBASIC12.88□□□□□ -0.35
ATP1B3P54709 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.88□□□□□ -0.35
ATP1B3P54709 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.88□□□□□ -0.35
ATP1B3P54709 DUX4L47-201ENST00000566374 394 ntBASIC12.88□□□□□ -0.35
ATP1B3P54709 SPDYE22P-201ENST00000582158 798 ntBASIC12.88□□□□□ -0.35
ATP1B3P54709 AC005498.2-205ENST00000593218 784 ntBASIC12.88□□□□□ -0.35
ATP1B3P54709 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 AC009118.2-201ENST00000613275 655 ntBASIC12.88□□□□□ -0.35
ATP1B3P54709 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 AL354702.1-201ENST00000442006 1960 ntBASIC12.88□□□□□ -0.35
ATP1B3P54709 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ATP1B3P54709 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ATP1B3P54709 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 AC105206.1-202ENST00000314927 2368 ntBASIC12.87□□□□□ -0.35
ATP1B3P54709 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.87□□□□□ -0.35
ATP1B3P54709 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.87□□□□□ -0.35
ATP1B3P54709 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.87□□□□□ -0.35
ATP1B3P54709 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ATP1B3P54709 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.87□□□□□ -0.35
ATP1B3P54709 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.87□□□□□ -0.35
ATP1B3P54709 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.87□□□□□ -0.35
ATP1B3P54709 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.87□□□□□ -0.35
ATP1B3P54709 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.87□□□□□ -0.35
ATP1B3P54709 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATP1B3P54709 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.87□□□□□ -0.35
ATP1B3P54709 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.87□□□□□ -0.35
ATP1B3P54709 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.87□□□□□ -0.35
ATP1B3P54709 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.87□□□□□ -0.35
ATP1B3P54709 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.87□□□□□ -0.35
ATP1B3P54709 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.87□□□□□ -0.35
ATP1B3P54709 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms