Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.3■□□□□ 0.36
CACNB3P54284 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.3■□□□□ 0.36
CACNB3P54284 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CACNB3P54284 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.3■□□□□ 0.36
CACNB3P54284 ST13P19-201ENST00000442505 1124 ntBASIC17.3■□□□□ 0.36
CACNB3P54284 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.3■□□□□ 0.36
CACNB3P54284 CHCHD2P9-201ENST00000461726 456 ntBASIC17.3■□□□□ 0.36
CACNB3P54284 CTBP2P4-201ENST00000513884 920 ntBASIC17.3■□□□□ 0.36
CACNB3P54284 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.3■□□□□ 0.36
CACNB3P54284 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.3■□□□□ 0.36
CACNB3P54284 MIR3180-2-201ENST00000581748 88 ntBASIC17.3■□□□□ 0.36
CACNB3P54284 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.3■□□□□ 0.36
CACNB3P54284 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.3■□□□□ 0.36
CACNB3P54284 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CACNB3P54284 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CACNB3P54284 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNB3P54284 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.29■□□□□ 0.36
CACNB3P54284 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNB3P54284 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNB3P54284 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CACNB3P54284 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CACNB3P54284 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNB3P54284 AC114947.1-202ENST00000514136 344 ntBASIC17.29■□□□□ 0.36
CACNB3P54284 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.29■□□□□ 0.36
CACNB3P54284 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.29■□□□□ 0.36
CACNB3P54284 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CACNB3P54284 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CACNB3P54284 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CACNB3P54284 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNB3P54284 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNB3P54284 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNB3P54284 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CACNB3P54284 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNB3P54284 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.28■□□□□ 0.36
CACNB3P54284 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.28■□□□□ 0.36
CACNB3P54284 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CACNB3P54284 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.28■□□□□ 0.36
CACNB3P54284 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNB3P54284 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.28■□□□□ 0.36
CACNB3P54284 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CACNB3P54284 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.28■□□□□ 0.36
CACNB3P54284 AC012362.1-201ENST00000434906 739 ntBASIC17.28■□□□□ 0.36
CACNB3P54284 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.28■□□□□ 0.36
CACNB3P54284 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.28■□□□□ 0.36
CACNB3P54284 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNB3P54284 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 MIR6858-201ENST00000620733 67 ntBASIC17.28■□□□□ 0.36
CACNB3P54284 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.28■□□□□ 0.36
CACNB3P54284 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CACNB3P54284 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CACNB3P54284 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNB3P54284 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CACNB3P54284 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CACNB3P54284 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNB3P54284 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CACNB3P54284 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CACNB3P54284 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CACNB3P54284 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNB3P54284 AC006486.2-201ENST00000624246 2199 ntBASIC17.28■□□□□ 0.36
CACNB3P54284 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CACNB3P54284 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms