Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.2■□□□□ 0.18
PMS1P54277 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.2■□□□□ 0.18
PMS1P54277 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.2■□□□□ 0.18
PMS1P54277 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.2■□□□□ 0.18
PMS1P54277 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PMS1P54277 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.2■□□□□ 0.18
PMS1P54277 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PMS1P54277 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PMS1P54277 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.2■□□□□ 0.18
PMS1P54277 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.2■□□□□ 0.18
PMS1P54277 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.2■□□□□ 0.18
PMS1P54277 AC233724.13-201ENST00000598383 410 ntBASIC16.2■□□□□ 0.18
PMS1P54277 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.2■□□□□ 0.18
PMS1P54277 AC073413.1-201ENST00000603927 732 ntBASIC16.2■□□□□ 0.18
PMS1P54277 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.2■□□□□ 0.18
PMS1P54277 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.2■□□□□ 0.18
PMS1P54277 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.2■□□□□ 0.18
PMS1P54277 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PMS1P54277 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PMS1P54277 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PMS1P54277 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PMS1P54277 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.19■□□□□ 0.18
PMS1P54277 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
PMS1P54277 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.19■□□□□ 0.18
PMS1P54277 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PMS1P54277 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.19■□□□□ 0.18
PMS1P54277 AL512384.1-201ENST00000406683 331 ntBASIC16.19■□□□□ 0.18
PMS1P54277 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.19■□□□□ 0.18
PMS1P54277 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.19■□□□□ 0.18
PMS1P54277 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 AC011495.1-201ENST00000498085 584 ntBASIC16.19■□□□□ 0.18
PMS1P54277 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.19■□□□□ 0.18
PMS1P54277 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.19■□□□□ 0.18
PMS1P54277 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.19■□□□□ 0.18
PMS1P54277 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 AC015936.2-201ENST00000593177 259 ntBASIC16.19■□□□□ 0.18
PMS1P54277 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.19■□□□□ 0.18
PMS1P54277 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
PMS1P54277 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PMS1P54277 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
PMS1P54277 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
PMS1P54277 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.18■□□□□ 0.18
PMS1P54277 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.18■□□□□ 0.18
PMS1P54277 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PMS1P54277 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
PMS1P54277 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
PMS1P54277 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.18■□□□□ 0.18
PMS1P54277 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms