Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.32□□□□□ -0.44
EFNA4P52798 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.32□□□□□ -0.44
EFNA4P52798 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.32□□□□□ -0.44
EFNA4P52798 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.32□□□□□ -0.44
EFNA4P52798 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.32□□□□□ -0.44
EFNA4P52798 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.32□□□□□ -0.44
EFNA4P52798 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.32□□□□□ -0.44
EFNA4P52798 RN7SL67P-201ENST00000492147 296 ntBASIC12.32□□□□□ -0.44
EFNA4P52798 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.32□□□□□ -0.44
EFNA4P52798 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.32□□□□□ -0.44
EFNA4P52798 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.32□□□□□ -0.44
EFNA4P52798 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.32□□□□□ -0.44
EFNA4P52798 AC026803.1-201ENST00000569130 274 ntBASIC12.32□□□□□ -0.44
EFNA4P52798 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.32□□□□□ -0.44
EFNA4P52798 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.32□□□□□ -0.44
EFNA4P52798 AC103810.10-201ENST00000606504 343 ntBASIC12.32□□□□□ -0.44
EFNA4P52798 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.32□□□□□ -0.44
EFNA4P52798 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.32□□□□□ -0.44
EFNA4P52798 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.32□□□□□ -0.44
EFNA4P52798 AC092299.1-201ENST00000632679 757 ntBASIC12.32□□□□□ -0.44
EFNA4P52798 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.32□□□□□ -0.44
EFNA4P52798 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.32□□□□□ -0.44
EFNA4P52798 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.32□□□□□ -0.44
EFNA4P52798 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
EFNA4P52798 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 KRT8P28-201ENST00000433288 1390 ntBASIC12.31□□□□□ -0.44
EFNA4P52798 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.31□□□□□ -0.44
EFNA4P52798 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 AC144831.1-201ENST00000573312 2656 ntBASIC12.31□□□□□ -0.44
EFNA4P52798 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.31□□□□□ -0.44
EFNA4P52798 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.31□□□□□ -0.44
EFNA4P52798 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.31□□□□□ -0.44
EFNA4P52798 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
EFNA4P52798 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.31□□□□□ -0.44
EFNA4P52798 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.31□□□□□ -0.44
EFNA4P52798 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.31□□□□□ -0.44
EFNA4P52798 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.31□□□□□ -0.44
EFNA4P52798 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.31□□□□□ -0.44
EFNA4P52798 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.31□□□□□ -0.44
EFNA4P52798 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.31□□□□□ -0.44
EFNA4P52798 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.31□□□□□ -0.44
EFNA4P52798 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
EFNA4P52798 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.31□□□□□ -0.44
EFNA4P52798 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
EFNA4P52798 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 AL109837.1-201ENST00000603272 613 ntBASIC12.31□□□□□ -0.44
EFNA4P52798 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.31□□□□□ -0.44
EFNA4P52798 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 AC051619.9-201ENST00000623237 597 ntBASIC12.31□□□□□ -0.44
EFNA4P52798 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 AC139712.1-201ENST00000378256 1875 ntBASIC12.31□□□□□ -0.44
EFNA4P52798 AL136379.1-201ENST00000623471 2642 ntBASIC12.31□□□□□ -0.44
EFNA4P52798 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
EFNA4P52798 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
EFNA4P52798 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
EFNA4P52798 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms