Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF140P52738 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF140P52738 AC117489.1-201ENST00000625169 3217 ntBASIC14.62□□□□□ -0.07
ZNF140P52738 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ZNF140P52738 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF140P52738 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF140P52738 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF140P52738 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ZNF140P52738 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
ZNF140P52738 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ZNF140P52738 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF140P52738 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
ZNF140P52738 KLF2P1-201ENST00000447438 1042 ntBASIC14.61□□□□□ -0.07
ZNF140P52738 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF140P52738 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ZNF140P52738 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF140P52738 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF140P52738 AL162426.1-201ENST00000624141 743 ntBASIC14.61□□□□□ -0.07
ZNF140P52738 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF140P52738 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ZNF140P52738 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF140P52738 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ZNF140P52738 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF140P52738 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 AL008718.2-201ENST00000609206 1313 ntBASIC14.61□□□□□ -0.07
ZNF140P52738 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ZNF140P52738 AC015818.8-201ENST00000587907 1519 ntBASIC14.61□□□□□ -0.07
ZNF140P52738 HSPA8P5-201ENST00000456928 2069 ntBASIC14.61□□□□□ -0.07
ZNF140P52738 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF140P52738 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF140P52738 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ZNF140P52738 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ZNF140P52738 PKD1P5-201ENST00000532415 10291 ntBASIC14.6□□□□□ -0.07
ZNF140P52738 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ZNF140P52738 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.6□□□□□ -0.07
ZNF140P52738 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 HSPB1P2-201ENST00000448722 546 ntBASIC14.6□□□□□ -0.07
ZNF140P52738 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.6□□□□□ -0.07
ZNF140P52738 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 AC005586.2-201ENST00000563946 837 ntBASIC14.6□□□□□ -0.07
ZNF140P52738 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 AC010328.2-201ENST00000597698 1111 ntBASIC14.6□□□□□ -0.07
ZNF140P52738 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.6□□□□□ -0.07
ZNF140P52738 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.6□□□□□ -0.07
ZNF140P52738 AC104506.1-201ENST00000609247 429 ntBASIC14.6□□□□□ -0.07
ZNF140P52738 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.6□□□□□ -0.07
ZNF140P52738 Z98259.2-201ENST00000641583 609 ntBASIC14.6□□□□□ -0.07
ZNF140P52738 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
ZNF140P52738 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 GRK6P1-201ENST00000400595 1711 ntBASIC14.6□□□□□ -0.07
ZNF140P52738 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
ZNF140P52738 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
ZNF140P52738 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ZNF140P52738 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF140P52738 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.6□□□□□ -0.07
ZNF140P52738 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ZNF140P52738 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms