Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.8■□□□□ 0.28
COPB2P35606 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 AC018635.2-201ENST00000608625 364 ntBASIC16.8■□□□□ 0.28
COPB2P35606 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.8■□□□□ 0.28
COPB2P35606 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.8■□□□□ 0.28
COPB2P35606 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
COPB2P35606 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.79■□□□□ 0.28
COPB2P35606 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.79■□□□□ 0.28
COPB2P35606 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.79■□□□□ 0.28
COPB2P35606 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 LDHBP1-201ENST00000455730 1119 ntBASIC16.79■□□□□ 0.28
COPB2P35606 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.79■□□□□ 0.28
COPB2P35606 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.79■□□□□ 0.28
COPB2P35606 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.79■□□□□ 0.28
COPB2P35606 AL031713.1-201ENST00000564813 661 ntBASIC16.79■□□□□ 0.28
COPB2P35606 PHBP15-201ENST00000574228 665 ntBASIC16.79■□□□□ 0.28
COPB2P35606 AL109837.1-201ENST00000603272 613 ntBASIC16.79■□□□□ 0.28
COPB2P35606 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.79■□□□□ 0.28
COPB2P35606 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
COPB2P35606 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
COPB2P35606 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 TMBIM7P-202ENST00000641474 1516 ntBASIC16.79■□□□□ 0.28
COPB2P35606 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.79■□□□□ 0.28
COPB2P35606 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.79■□□□□ 0.28
COPB2P35606 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
COPB2P35606 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPB2P35606 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.78■□□□□ 0.28
COPB2P35606 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.78■□□□□ 0.28
COPB2P35606 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COPB2P35606 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.78■□□□□ 0.28
COPB2P35606 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
COPB2P35606 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.78■□□□□ 0.28
COPB2P35606 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
COPB2P35606 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
COPB2P35606 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.78■□□□□ 0.28
COPB2P35606 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.78■□□□□ 0.28
COPB2P35606 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.78■□□□□ 0.28
COPB2P35606 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 IQSEC3P1-201ENST00000538799 536 ntBASIC16.78■□□□□ 0.28
COPB2P35606 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.78■□□□□ 0.28
COPB2P35606 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.78■□□□□ 0.28
COPB2P35606 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
COPB2P35606 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.78■□□□□ 0.28
COPB2P35606 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.78■□□□□ 0.28
COPB2P35606 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
COPB2P35606 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.78■□□□□ 0.28
COPB2P35606 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COPB2P35606 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COPB2P35606 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPB2P35606 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.78■□□□□ 0.28
COPB2P35606 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
COPB2P35606 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.78■□□□□ 0.28
COPB2P35606 FLJ16779-201ENST00000612722 7638 ntBASIC16.77■□□□□ 0.28
COPB2P35606 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
COPB2P35606 KRT8P28-201ENST00000433288 1390 ntBASIC16.77■□□□□ 0.28
COPB2P35606 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
COPB2P35606 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
COPB2P35606 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
COPB2P35606 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.77■□□□□ 0.28
COPB2P35606 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.77■□□□□ 0.28
COPB2P35606 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.77■□□□□ 0.28
COPB2P35606 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.77■□□□□ 0.28
COPB2P35606 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms