Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLCN1P35523 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCN1P35523 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.85■□□□□ 0.29
CLCN1P35523 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN1P35523 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLCN1P35523 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN1P35523 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLCN1P35523 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.85■□□□□ 0.29
CLCN1P35523 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN1P35523 AC012531.1-201ENST00000562848 2680 ntBASIC16.84■□□□□ 0.29
CLCN1P35523 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLCN1P35523 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN1P35523 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CLCN1P35523 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 LPO-204ENST00000543544 2350 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN1P35523 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN1P35523 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLCN1P35523 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.84■□□□□ 0.29
CLCN1P35523 CNN2P2-201ENST00000443536 909 ntBASIC16.84■□□□□ 0.29
CLCN1P35523 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN1P35523 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 CNN2P3-201ENST00000450201 906 ntBASIC16.84■□□□□ 0.29
CLCN1P35523 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.84■□□□□ 0.29
CLCN1P35523 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.84■□□□□ 0.29
CLCN1P35523 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN1P35523 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.84■□□□□ 0.29
CLCN1P35523 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN1P35523 GPALPP1-207ENST00000611650 899 ntBASIC16.84■□□□□ 0.29
CLCN1P35523 TEX28P1-201ENST00000613479 1221 ntBASIC16.84■□□□□ 0.29
CLCN1P35523 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLCN1P35523 TEX28P2-201ENST00000617764 1221 ntBASIC16.84■□□□□ 0.29
CLCN1P35523 AL136317.3-201ENST00000618497 906 ntBASIC16.84■□□□□ 0.29
CLCN1P35523 MIR6069-201ENST00000620069 79 ntBASIC16.84■□□□□ 0.29
CLCN1P35523 AC093028.1-201ENST00000622998 982 ntBASIC16.84■□□□□ 0.29
CLCN1P35523 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN1P35523 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CLCN1P35523 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLCN1P35523 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN1P35523 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN1P35523 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CLCN1P35523 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLCN1P35523 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCN1P35523 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CLCN1P35523 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC16.83■□□□□ 0.28
CLCN1P35523 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLCN1P35523 AC010740.1-201ENST00000417035 684 ntBASIC16.83■□□□□ 0.28
CLCN1P35523 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLCN1P35523 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLCN1P35523 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.83■□□□□ 0.28
CLCN1P35523 AL512361.1-201ENST00000554200 418 ntBASIC16.83■□□□□ 0.28
CLCN1P35523 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCN1P35523 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCN1P35523 Z97205.2-201ENST00000564697 1639 ntBASIC16.83■□□□□ 0.28
CLCN1P35523 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCN1P35523 AC025048.3-201ENST00000590609 569 ntBASIC16.83■□□□□ 0.28
CLCN1P35523 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 AC005702.4-201ENST00000618393 416 ntBASIC16.83■□□□□ 0.28
CLCN1P35523 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCN1P35523 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN1P35523 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms