Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC010234.1-201ENST00000494599 870 ntBASIC19.44■□□□□ 0.7
USP6P35125 AREG-202ENST00000502307 956 ntTSL 5 BASIC19.44■□□□□ 0.7
USP6P35125 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC19.44■□□□□ 0.7
USP6P35125 AL022344.2-201ENST00000568976 968 ntBASIC19.44■□□□□ 0.7
USP6P35125 AC012073.1-201ENST00000606114 1108 ntBASIC19.44■□□□□ 0.7
USP6P35125 FO393412.1-201ENST00000619841 382 ntBASIC19.44■□□□□ 0.7
USP6P35125 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC19.44■□□□□ 0.7
USP6P35125 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.44■□□□□ 0.7
USP6P35125 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
USP6P35125 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP6P35125 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.44■□□□□ 0.7
USP6P35125 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 KRT8P18-201ENST00000413425 1445 ntBASIC19.44■□□□□ 0.7
USP6P35125 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
USP6P35125 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
USP6P35125 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP6P35125 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP6P35125 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
USP6P35125 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP6P35125 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC19.43■□□□□ 0.7
USP6P35125 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC19.43■□□□□ 0.7
USP6P35125 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC19.43■□□□□ 0.7
USP6P35125 AL139008.1-201ENST00000437894 228 ntBASIC19.43■□□□□ 0.7
USP6P35125 RN7SL23P-201ENST00000484055 275 ntBASIC19.43■□□□□ 0.7
USP6P35125 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC19.43■□□□□ 0.7
USP6P35125 PGAM1P12-201ENST00000505622 748 ntBASIC19.43■□□□□ 0.7
USP6P35125 RNA5SP406-201ENST00000516106 112 ntBASIC19.43■□□□□ 0.7
USP6P35125 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC19.43■□□□□ 0.7
USP6P35125 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC19.43■□□□□ 0.7
USP6P35125 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC19.43■□□□□ 0.7
USP6P35125 AC226150.1-201ENST00000544259 466 ntBASIC19.43■□□□□ 0.7
USP6P35125 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC19.43■□□□□ 0.7
USP6P35125 AL118522.1-201ENST00000611368 560 ntBASIC19.43■□□□□ 0.7
USP6P35125 AC073592.2-201ENST00000623062 780 ntBASIC19.43■□□□□ 0.7
USP6P35125 AL451007.2-201ENST00000632004 563 ntBASIC19.43■□□□□ 0.7
USP6P35125 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC19.43■□□□□ 0.7
USP6P35125 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP6P35125 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
USP6P35125 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP6P35125 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP6P35125 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP6P35125 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP6P35125 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.43■□□□□ 0.7
USP6P35125 MTHFR-210ENST00000641407 2387 ntBASIC19.43■□□□□ 0.7
USP6P35125 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP6P35125 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP6P35125 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
USP6P35125 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
USP6P35125 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP6P35125 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6P35125 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 CMC2-204ENST00000562713 573 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6P35125 CMC2-209ENST00000565108 399 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC19.42■□□□□ 0.7
USP6P35125 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6P35125 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
USP6P35125 AC244250.3-201ENST00000620749 366 ntBASIC19.42■□□□□ 0.7
USP6P35125 AC011471.3-201ENST00000623576 402 ntBASIC19.42■□□□□ 0.7
USP6P35125 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
USP6P35125 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.42■□□□□ 0.7
USP6P35125 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
USP6P35125 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 AC126177.1-201ENST00000547829 2218 ntBASIC19.42■□□□□ 0.7
USP6P35125 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms