Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
CKS2P33552 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CKS2P33552 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
CKS2P33552 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC10.9□□□□□ -0.66
CKS2P33552 CR383656.2-201ENST00000548656 2254 ntBASIC10.9□□□□□ -0.66
CKS2P33552 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CKS2P33552 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CKS2P33552 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CKS2P33552 AL355306.1-201ENST00000415580 579 ntBASIC10.9□□□□□ -0.66
CKS2P33552 HIST3H2BA-201ENST00000436555 524 ntBASIC10.9□□□□□ -0.66
CKS2P33552 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
CKS2P33552 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 SDHD-206ENST00000528182 754 ntTSL 3 BASIC10.9□□□□□ -0.66
CKS2P33552 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.9□□□□□ -0.66
CKS2P33552 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.9□□□□□ -0.66
CKS2P33552 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC10.9□□□□□ -0.66
CKS2P33552 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.9□□□□□ -0.66
CKS2P33552 AC116407.3-201ENST00000623905 1129 ntBASIC10.9□□□□□ -0.66
CKS2P33552 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC10.9□□□□□ -0.66
CKS2P33552 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.9□□□□□ -0.66
CKS2P33552 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS2P33552 AL445209.1-201ENST00000607269 3491 ntBASIC10.9□□□□□ -0.66
CKS2P33552 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS2P33552 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
CKS2P33552 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
CKS2P33552 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
CKS2P33552 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
CKS2P33552 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
CKS2P33552 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
CKS2P33552 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CKS2P33552 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CKS2P33552 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.9□□□□□ -0.67
CKS2P33552 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC10.9□□□□□ -0.67
CKS2P33552 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
CKS2P33552 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CKS2P33552 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CKS2P33552 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms