Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.59□□□□□ -0.23
SHC1P29353 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SHC1P29353 AC078819.1-201ENST00000547454 765 ntBASIC13.59□□□□□ -0.23
SHC1P29353 AC012085.1-201ENST00000548270 765 ntBASIC13.59□□□□□ -0.23
SHC1P29353 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.59□□□□□ -0.23
SHC1P29353 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.59□□□□□ -0.23
SHC1P29353 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SHC1P29353 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SHC1P29353 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SHC1P29353 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SHC1P29353 AL354718.3-201ENST00000616414 581 ntBASIC13.59□□□□□ -0.23
SHC1P29353 MIR6775-201ENST00000617557 69 ntBASIC13.59□□□□□ -0.23
SHC1P29353 ENPP7P14-201ENST00000621765 1040 ntBASIC13.59□□□□□ -0.23
SHC1P29353 CR382287.1-201ENST00000623954 586 ntBASIC13.59□□□□□ -0.23
SHC1P29353 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.59□□□□□ -0.23
SHC1P29353 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.59□□□□□ -0.23
SHC1P29353 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SHC1P29353 AC152010.1-201ENST00000415779 2006 ntBASIC13.59□□□□□ -0.23
SHC1P29353 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.58□□□□□ -0.23
SHC1P29353 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.23
SHC1P29353 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SHC1P29353 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SHC1P29353 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SHC1P29353 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 AC107918.4-201ENST00000641966 3141 ntBASIC13.58□□□□□ -0.24
SHC1P29353 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.58□□□□□ -0.24
SHC1P29353 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 ARSEP1-201ENST00000420443 635 ntBASIC13.58□□□□□ -0.24
SHC1P29353 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
SHC1P29353 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.58□□□□□ -0.24
SHC1P29353 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.58□□□□□ -0.24
SHC1P29353 CTBP2P5-201ENST00000454986 1264 ntBASIC13.58□□□□□ -0.24
SHC1P29353 AC119751.2-201ENST00000504529 210 ntBASIC13.58□□□□□ -0.24
SHC1P29353 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SHC1P29353 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SHC1P29353 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.58□□□□□ -0.24
SHC1P29353 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 MIR4259-201ENST00000584466 101 ntBASIC13.58□□□□□ -0.24
SHC1P29353 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.58□□□□□ -0.24
SHC1P29353 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
SHC1P29353 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.58□□□□□ -0.24
SHC1P29353 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.58□□□□□ -0.24
SHC1P29353 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SHC1P29353 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SHC1P29353 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.58□□□□□ -0.24
SHC1P29353 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SHC1P29353 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHC1P29353 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms