Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO1P25800 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LMO1P25800 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 KHSRPP1-201ENST00000427983 1768 ntBASIC12.4□□□□□ -0.42
LMO1P25800 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.4□□□□□ -0.42
LMO1P25800 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
LMO1P25800 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
LMO1P25800 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
LMO1P25800 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
LMO1P25800 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 AL590440.2-201ENST00000641973 1595 ntBASIC12.39□□□□□ -0.43
LMO1P25800 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 OR2I1P-210ENST00000642037 4691 ntBASIC12.39□□□□□ -0.43
LMO1P25800 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LMO1P25800 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LMO1P25800 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LMO1P25800 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 OR8S1-201ENST00000310194 1080 ntBASIC12.39□□□□□ -0.43
LMO1P25800 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO1P25800 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.39□□□□□ -0.43
LMO1P25800 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
LMO1P25800 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.39□□□□□ -0.43
LMO1P25800 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO1P25800 PUDPP3-201ENST00000445368 636 ntBASIC12.39□□□□□ -0.43
LMO1P25800 KRT17P7-201ENST00000451704 1104 ntBASIC12.39□□□□□ -0.43
LMO1P25800 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 RN7SL692P-201ENST00000464677 288 ntBASIC12.39□□□□□ -0.43
LMO1P25800 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO1P25800 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.39□□□□□ -0.43
LMO1P25800 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO1P25800 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO1P25800 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO1P25800 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 AL596325.1-201ENST00000563991 1082 ntBASIC12.39□□□□□ -0.43
LMO1P25800 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.39□□□□□ -0.43
LMO1P25800 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 BTNL10-201ENST00000595971 695 ntBASIC12.39□□□□□ -0.43
LMO1P25800 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.39□□□□□ -0.43
LMO1P25800 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.39□□□□□ -0.43
LMO1P25800 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.39□□□□□ -0.43
LMO1P25800 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO1P25800 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO1P25800 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 AC215219.1-201ENST00000400706 1817 ntBASIC12.39□□□□□ -0.43
LMO1P25800 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
LMO1P25800 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO1P25800 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LMO1P25800 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LMO1P25800 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LMO1P25800 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LMO1P25800 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO1P25800 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.38□□□□□ -0.43
LMO1P25800 RN7SL832P-201ENST00000607781 1756 ntBASIC12.38□□□□□ -0.43
LMO1P25800 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms