Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.78□□□□□ -0.36
GABRR1P24046 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.78□□□□□ -0.36
GABRR1P24046 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.78□□□□□ -0.36
GABRR1P24046 AC099568.2-201ENST00000609194 695 ntBASIC12.78□□□□□ -0.36
GABRR1P24046 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
GABRR1P24046 AL662799.1-202ENST00000614205 422 ntBASIC12.78□□□□□ -0.36
GABRR1P24046 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GABRR1P24046 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GABRR1P24046 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.78□□□□□ -0.36
GABRR1P24046 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.78□□□□□ -0.36
GABRR1P24046 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GABRR1P24046 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.78□□□□□ -0.36
GABRR1P24046 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.78□□□□□ -0.36
GABRR1P24046 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GABRR1P24046 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GABRR1P24046 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GABRR1P24046 BEND3P1-201ENST00000421591 1944 ntBASIC12.78□□□□□ -0.36
GABRR1P24046 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
GABRR1P24046 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
GABRR1P24046 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.78□□□□□ -0.36
GABRR1P24046 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.78□□□□□ -0.36
GABRR1P24046 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
GABRR1P24046 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
GABRR1P24046 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.78□□□□□ -0.36
GABRR1P24046 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GABRR1P24046 AGGF1P1-201ENST00000509500 2073 ntBASIC12.77□□□□□ -0.36
GABRR1P24046 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.77□□□□□ -0.36
GABRR1P24046 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
GABRR1P24046 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.77□□□□□ -0.36
GABRR1P24046 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
GABRR1P24046 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
GABRR1P24046 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
GABRR1P24046 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
GABRR1P24046 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GABRR1P24046 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GABRR1P24046 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.77□□□□□ -0.36
GABRR1P24046 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
GABRR1P24046 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GABRR1P24046 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.77□□□□□ -0.36
GABRR1P24046 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GABRR1P24046 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GABRR1P24046 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
GABRR1P24046 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.77□□□□□ -0.37
GABRR1P24046 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 AL645937.2-201ENST00000396808 931 ntBASIC12.77□□□□□ -0.37
GABRR1P24046 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.77□□□□□ -0.37
GABRR1P24046 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.77□□□□□ -0.37
GABRR1P24046 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.77□□□□□ -0.37
GABRR1P24046 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.77□□□□□ -0.37
GABRR1P24046 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.77□□□□□ -0.37
GABRR1P24046 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.77□□□□□ -0.37
GABRR1P24046 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.77□□□□□ -0.37
GABRR1P24046 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.77□□□□□ -0.37
GABRR1P24046 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.77□□□□□ -0.37
GABRR1P24046 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.77□□□□□ -0.37
GABRR1P24046 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.77□□□□□ -0.37
GABRR1P24046 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.77□□□□□ -0.37
GABRR1P24046 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.77□□□□□ -0.37
GABRR1P24046 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.77□□□□□ -0.37
GABRR1P24046 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.77□□□□□ -0.37
GABRR1P24046 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
GABRR1P24046 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.77□□□□□ -0.37
GABRR1P24046 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.77□□□□□ -0.37
GABRR1P24046 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.77□□□□□ -0.37
GABRR1P24046 MIR8072-201ENST00000614241 80 ntBASIC12.77□□□□□ -0.37
GABRR1P24046 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.77□□□□□ -0.37
GABRR1P24046 AC007431.3-201ENST00000623221 587 ntBASIC12.77□□□□□ -0.37
GABRR1P24046 BX539320.1-201ENST00000623759 877 ntBASIC12.77□□□□□ -0.37
GABRR1P24046 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
GABRR1P24046 MIR193BHG-211ENST00000641433 5365 ntBASIC12.77□□□□□ -0.37
GABRR1P24046 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 AL391825.1-201ENST00000457671 1364 ntBASIC12.77□□□□□ -0.37
GABRR1P24046 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.77□□□□□ -0.37
GABRR1P24046 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
GABRR1P24046 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
GABRR1P24046 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.77□□□□□ -0.37
GABRR1P24046 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.77□□□□□ -0.37
GABRR1P24046 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABRR1P24046 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms