Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.19■□□□□ 0.18
SMPD1P17405 AC090502.4-201ENST00000551714 1386 ntBASIC16.19■□□□□ 0.18
SMPD1P17405 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 MIR645-201ENST00000385283 94 ntBASIC16.19■□□□□ 0.18
SMPD1P17405 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.19■□□□□ 0.18
SMPD1P17405 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.19■□□□□ 0.18
SMPD1P17405 AC097065.1-201ENST00000425737 517 ntBASIC16.19■□□□□ 0.18
SMPD1P17405 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.19■□□□□ 0.18
SMPD1P17405 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.19■□□□□ 0.18
SMPD1P17405 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SMPD1P17405 RPL18AP8-201ENST00000486071 528 ntBASIC16.19■□□□□ 0.18
SMPD1P17405 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SMPD1P17405 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.19■□□□□ 0.18
SMPD1P17405 CR383656.3-201ENST00000551315 183 ntBASIC16.19■□□□□ 0.18
SMPD1P17405 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.19■□□□□ 0.18
SMPD1P17405 RN7SL470P-201ENST00000583069 259 ntBASIC16.19■□□□□ 0.18
SMPD1P17405 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SMPD1P17405 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SMPD1P17405 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SMPD1P17405 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SMPD1P17405 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SMPD1P17405 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SMPD1P17405 AC018529.2-202ENST00000611482 3087 ntBASIC16.19■□□□□ 0.18
SMPD1P17405 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.19■□□□□ 0.18
SMPD1P17405 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.19■□□□□ 0.18
SMPD1P17405 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 AC022532.1-201ENST00000624563 1728 ntBASIC16.19■□□□□ 0.18
SMPD1P17405 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SMPD1P17405 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMPD1P17405 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.19■□□□□ 0.18
SMPD1P17405 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.18■□□□□ 0.18
SMPD1P17405 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.18■□□□□ 0.18
SMPD1P17405 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.18■□□□□ 0.18
SMPD1P17405 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.18■□□□□ 0.18
SMPD1P17405 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.18■□□□□ 0.18
SMPD1P17405 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 GUSBP10-201ENST00000417412 665 ntBASIC16.18■□□□□ 0.18
SMPD1P17405 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.18■□□□□ 0.18
SMPD1P17405 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.18■□□□□ 0.18
SMPD1P17405 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.18■□□□□ 0.18
SMPD1P17405 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMPD1P17405 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.18■□□□□ 0.18
SMPD1P17405 AC021016.3-201ENST00000608367 477 ntBASIC16.18■□□□□ 0.18
SMPD1P17405 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.18■□□□□ 0.18
SMPD1P17405 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.18■□□□□ 0.18
SMPD1P17405 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.18■□□□□ 0.18
SMPD1P17405 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SMPD1P17405 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMPD1P17405 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.17■□□□□ 0.18
SMPD1P17405 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 AJ011931.1-201ENST00000618749 2492 ntBASIC16.17■□□□□ 0.18
SMPD1P17405 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 AL512306.1-201ENST00000432698 848 ntBASIC16.17■□□□□ 0.18
SMPD1P17405 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.17■□□□□ 0.18
SMPD1P17405 KRT18P66-201ENST00000452970 1269 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms