Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 MYADML-201ENST00000474610 2147 ntBASIC13.25□□□□□ -0.29
HLA-DOBP13765 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DOBP13765 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.25□□□□□ -0.29
HLA-DOBP13765 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 AL354989.2-201ENST00000435838 1540 ntBASIC13.24□□□□□ -0.29
HLA-DOBP13765 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 HSPA7-201ENST00000445535 1927 ntBASIC13.24□□□□□ -0.29
HLA-DOBP13765 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 GAPDHP21-201ENST00000450301 1010 ntBASIC13.24□□□□□ -0.29
HLA-DOBP13765 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.24□□□□□ -0.29
HLA-DOBP13765 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.24□□□□□ -0.29
HLA-DOBP13765 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DOBP13765 PDIA3P1-201ENST00000471856 1510 ntBASIC13.23□□□□□ -0.29
HLA-DOBP13765 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 AC152010.1-201ENST00000415779 2006 ntBASIC13.23□□□□□ -0.29
HLA-DOBP13765 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 MIR1202-201ENST00000408529 83 ntBASIC13.23□□□□□ -0.29
HLA-DOBP13765 AC004945.1-201ENST00000416738 983 ntBASIC13.23□□□□□ -0.29
HLA-DOBP13765 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.23□□□□□ -0.29
HLA-DOBP13765 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 KRT43P-201ENST00000434019 910 ntBASIC13.23□□□□□ -0.29
HLA-DOBP13765 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms