Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.31■□□□□ 0.2
COL11A1P12107 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.31■□□□□ 0.2
COL11A1P12107 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.31■□□□□ 0.2
COL11A1P12107 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.31■□□□□ 0.2
COL11A1P12107 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.31■□□□□ 0.2
COL11A1P12107 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.31■□□□□ 0.2
COL11A1P12107 C2orf69P1-201ENST00000563532 1093 ntBASIC16.31■□□□□ 0.2
COL11A1P12107 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.31■□□□□ 0.2
COL11A1P12107 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.31■□□□□ 0.2
COL11A1P12107 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.31■□□□□ 0.2
COL11A1P12107 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.31■□□□□ 0.2
COL11A1P12107 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
COL11A1P12107 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
COL11A1P12107 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.31■□□□□ 0.2
COL11A1P12107 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
COL11A1P12107 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
COL11A1P12107 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.31■□□□□ 0.2
COL11A1P12107 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.31■□□□□ 0.2
COL11A1P12107 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
COL11A1P12107 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COL11A1P12107 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.31■□□□□ 0.2
COL11A1P12107 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.31■□□□□ 0.2
COL11A1P12107 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 MIR4472-1-201ENST00000584349 80 ntBASIC16.31■□□□□ 0.2
COL11A1P12107 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.31■□□□□ 0.2
COL11A1P12107 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.31■□□□□ 0.2
COL11A1P12107 AC007250.1-201ENST00000608934 338 ntBASIC16.31■□□□□ 0.2
COL11A1P12107 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.31■□□□□ 0.2
COL11A1P12107 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COL11A1P12107 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.3■□□□□ 0.2
COL11A1P12107 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.3■□□□□ 0.2
COL11A1P12107 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
COL11A1P12107 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
COL11A1P12107 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.3■□□□□ 0.2
COL11A1P12107 BX679664.3-201ENST00000414070 555 ntBASIC16.3■□□□□ 0.2
COL11A1P12107 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.3■□□□□ 0.2
COL11A1P12107 AC018638.5-201ENST00000450885 754 ntBASIC16.3■□□□□ 0.2
COL11A1P12107 AC113935.1-201ENST00000471722 555 ntBASIC16.3■□□□□ 0.2
COL11A1P12107 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.3■□□□□ 0.2
COL11A1P12107 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.3■□□□□ 0.2
COL11A1P12107 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.3■□□□□ 0.2
COL11A1P12107 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.3■□□□□ 0.2
COL11A1P12107 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.3■□□□□ 0.2
COL11A1P12107 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.3■□□□□ 0.2
COL11A1P12107 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.3■□□□□ 0.2
COL11A1P12107 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.3■□□□□ 0.2
COL11A1P12107 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COL11A1P12107 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL11A1P12107 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COL11A1P12107 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COL11A1P12107 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.29■□□□□ 0.2
COL11A1P12107 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 USP17L6P-201ENST00000382470 1197 ntBASIC16.29■□□□□ 0.2
COL11A1P12107 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.29■□□□□ 0.2
COL11A1P12107 RN7SL396P-201ENST00000471086 295 ntBASIC16.29■□□□□ 0.2
COL11A1P12107 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.29■□□□□ 0.2
COL11A1P12107 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.29■□□□□ 0.2
COL11A1P12107 CHCHD2P2-201ENST00000503744 321 ntBASIC16.29■□□□□ 0.2
COL11A1P12107 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.29■□□□□ 0.2
COL11A1P12107 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.29■□□□□ 0.2
COL11A1P12107 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.29■□□□□ 0.2
COL11A1P12107 AC006158.1-201ENST00000610661 249 ntBASIC16.29■□□□□ 0.2
COL11A1P12107 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms