Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CHRNB1P11230 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.92□□□□□ -0.02
CHRNB1P11230 AP005117.1-202ENST00000581724 1908 ntBASIC14.92□□□□□ -0.02
CHRNB1P11230 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNB1P11230 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNB1P11230 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHRNB1P11230 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNB1P11230 AC012362.1-201ENST00000434906 739 ntBASIC14.92□□□□□ -0.02
CHRNB1P11230 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.92□□□□□ -0.02
CHRNB1P11230 RPSAP15-201ENST00000448168 861 ntBASIC14.92□□□□□ -0.02
CHRNB1P11230 DUTP3-201ENST00000450025 415 ntBASIC14.92□□□□□ -0.02
CHRNB1P11230 PIN4P1-201ENST00000451079 396 ntBASIC14.92□□□□□ -0.02
CHRNB1P11230 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.92□□□□□ -0.02
CHRNB1P11230 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNB1P11230 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNB1P11230 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNB1P11230 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNB1P11230 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNB1P11230 MIR6756-201ENST00000616240 63 ntBASIC14.92□□□□□ -0.02
CHRNB1P11230 MIR6858-201ENST00000620733 67 ntBASIC14.92□□□□□ -0.02
CHRNB1P11230 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CHRNB1P11230 AC092299.1-201ENST00000632679 757 ntBASIC14.92□□□□□ -0.02
CHRNB1P11230 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHRNB1P11230 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNB1P11230 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CHRNB1P11230 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 AC018629.1-201ENST00000623381 1736 ntBASIC14.92□□□□□ -0.02
CHRNB1P11230 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB1P11230 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHRNB1P11230 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CHRNB1P11230 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNB1P11230 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRNB1P11230 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 AL807761.2-201ENST00000422849 729 ntBASIC14.91□□□□□ -0.02
CHRNB1P11230 TSPY25P-201ENST00000429463 745 ntBASIC14.91□□□□□ -0.02
CHRNB1P11230 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRNB1P11230 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 RPL18AP3-201ENST00000462885 528 ntBASIC14.91□□□□□ -0.02
CHRNB1P11230 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNB1P11230 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNB1P11230 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNB1P11230 AC009560.1-201ENST00000620208 434 ntBASIC14.91□□□□□ -0.02
CHRNB1P11230 AL161773.1-201ENST00000624845 863 ntBASIC14.91□□□□□ -0.02
CHRNB1P11230 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNB1P11230 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNB1P11230 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNB1P11230 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CHRNB1P11230 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNB1P11230 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHRNB1P11230 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CHRNB1P11230 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNB1P11230 AC079781.5-202ENST00000641784 3743 ntBASIC14.91□□□□□ -0.02
CHRNB1P11230 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB1P11230 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNB1P11230 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNB1P11230 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms