Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.46■□□□□ 0.23
HOXC6P09630 BCAS2P2-201ENST00000425064 674 ntBASIC16.46■□□□□ 0.23
HOXC6P09630 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.46■□□□□ 0.23
HOXC6P09630 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.46■□□□□ 0.23
HOXC6P09630 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.46■□□□□ 0.23
HOXC6P09630 CR383656.3-201ENST00000551315 183 ntBASIC16.46■□□□□ 0.23
HOXC6P09630 AC138701.2-201ENST00000553634 226 ntBASIC16.46■□□□□ 0.23
HOXC6P09630 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.46■□□□□ 0.23
HOXC6P09630 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.46■□□□□ 0.23
HOXC6P09630 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.46■□□□□ 0.23
HOXC6P09630 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
HOXC6P09630 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.46■□□□□ 0.23
HOXC6P09630 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
HOXC6P09630 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HOXC6P09630 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.46■□□□□ 0.23
HOXC6P09630 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HOXC6P09630 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HOXC6P09630 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HOXC6P09630 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HOXC6P09630 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXC6P09630 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HOXC6P09630 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXC6P09630 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXC6P09630 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC6P09630 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HOXC6P09630 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXC6P09630 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.45■□□□□ 0.22
HOXC6P09630 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.45■□□□□ 0.22
HOXC6P09630 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.45■□□□□ 0.22
HOXC6P09630 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC6P09630 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.45■□□□□ 0.22
HOXC6P09630 C2orf69P1-201ENST00000563532 1093 ntBASIC16.45■□□□□ 0.22
HOXC6P09630 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HOXC6P09630 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HOXC6P09630 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HOXC6P09630 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC6P09630 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC6P09630 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HOXC6P09630 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HOXC6P09630 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC6P09630 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HOXC6P09630 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC6P09630 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HOXC6P09630 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC6P09630 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXC6P09630 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HOXC6P09630 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 KHSRPP1-201ENST00000427983 1768 ntBASIC16.44■□□□□ 0.22
HOXC6P09630 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HOXC6P09630 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
HOXC6P09630 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.44■□□□□ 0.22
HOXC6P09630 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HOXC6P09630 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HOXC6P09630 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HOXC6P09630 AC004837.1-201ENST00000446267 564 ntBASIC16.44■□□□□ 0.22
HOXC6P09630 DPY19L2P5-201ENST00000456300 331 ntBASIC16.44■□□□□ 0.22
HOXC6P09630 RPL18AP8-201ENST00000486071 528 ntBASIC16.44■□□□□ 0.22
HOXC6P09630 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.44■□□□□ 0.22
HOXC6P09630 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.44■□□□□ 0.22
HOXC6P09630 RNA5SP417-201ENST00000516459 108 ntBASIC16.44■□□□□ 0.22
HOXC6P09630 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HOXC6P09630 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms