Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.74□□□□□ -0.37
ACAA1P09110 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
ACAA1P09110 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 ACTG1P3-201ENST00000431775 1114 ntBASIC12.74□□□□□ -0.37
ACAA1P09110 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ACAA1P09110 COX20P2-201ENST00000452636 358 ntBASIC12.74□□□□□ -0.37
ACAA1P09110 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.74□□□□□ -0.37
ACAA1P09110 AP005018.1-201ENST00000525475 301 ntBASIC12.74□□□□□ -0.37
ACAA1P09110 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.74□□□□□ -0.37
ACAA1P09110 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ACAA1P09110 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.74□□□□□ -0.37
ACAA1P09110 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.74□□□□□ -0.37
ACAA1P09110 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.74□□□□□ -0.37
ACAA1P09110 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
ACAA1P09110 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.74□□□□□ -0.37
ACAA1P09110 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.74□□□□□ -0.37
ACAA1P09110 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.74□□□□□ -0.37
ACAA1P09110 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACAA1P09110 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 EIF3FP3-201ENST00000434851 1086 ntBASIC12.73□□□□□ -0.37
ACAA1P09110 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.73□□□□□ -0.37
ACAA1P09110 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.73□□□□□ -0.37
ACAA1P09110 AC093433.1-201ENST00000458048 571 ntBASIC12.73□□□□□ -0.37
ACAA1P09110 TPT1P11-201ENST00000458482 498 ntBASIC12.73□□□□□ -0.37
ACAA1P09110 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.73□□□□□ -0.37
ACAA1P09110 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 POM121L4P-202ENST00000427789 1891 ntBASIC12.73□□□□□ -0.37
ACAA1P09110 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.73□□□□□ -0.37
ACAA1P09110 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.73□□□□□ -0.37
ACAA1P09110 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACAA1P09110 LRRC59-203ENST00000576448 1531 ntBASIC12.72□□□□□ -0.37
ACAA1P09110 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ACAA1P09110 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.72□□□□□ -0.37
ACAA1P09110 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ACAA1P09110 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ACAA1P09110 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
ACAA1P09110 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ACAA1P09110 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ACAA1P09110 AC113367.3-201ENST00000508316 1912 ntBASIC12.72□□□□□ -0.37
ACAA1P09110 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.72□□□□□ -0.37
ACAA1P09110 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms