Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRGV3P03979 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV3P03979 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.67□□□□□ -0.54
TRGV3P03979 OR8S1-201ENST00000310194 1080 ntBASIC11.67□□□□□ -0.54
TRGV3P03979 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRGV3P03979 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 AC079776.1-201ENST00000401540 1152 ntBASIC11.67□□□□□ -0.54
TRGV3P03979 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.67□□□□□ -0.54
TRGV3P03979 MIR1909-201ENST00000411312 80 ntBASIC11.67□□□□□ -0.54
TRGV3P03979 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.67□□□□□ -0.54
TRGV3P03979 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV3P03979 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV3P03979 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV3P03979 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRGV3P03979 AP000812.2-201ENST00000538934 718 ntBASIC11.67□□□□□ -0.54
TRGV3P03979 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV3P03979 AC023310.1-201ENST00000554836 735 ntBASIC11.67□□□□□ -0.54
TRGV3P03979 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.67□□□□□ -0.54
TRGV3P03979 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.67□□□□□ -0.54
TRGV3P03979 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.67□□□□□ -0.54
TRGV3P03979 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRGV3P03979 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.67□□□□□ -0.54
TRGV3P03979 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRGV3P03979 AC003102.2-201ENST00000589195 1469 ntBASIC11.67□□□□□ -0.54
TRGV3P03979 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRGV3P03979 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV3P03979 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRGV3P03979 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.67□□□□□ -0.54
TRGV3P03979 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV3P03979 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 AC011840.2-201ENST00000563063 1520 ntBASIC11.66□□□□□ -0.54
TRGV3P03979 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV3P03979 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV3P03979 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 AC006001.1-201ENST00000325130 474 ntBASIC11.66□□□□□ -0.54
TRGV3P03979 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV3P03979 GK-202ENST00000378941 458 ntTSL 3 BASIC11.66□□□□□ -0.54
TRGV3P03979 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 MIR658-201ENST00000385210 100 ntBASIC11.66□□□□□ -0.54
TRGV3P03979 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV3P03979 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV3P03979 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV3P03979 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 ATP5G2P4-201ENST00000442175 420 ntBASIC11.66□□□□□ -0.54
TRGV3P03979 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 AL391280.1-201ENST00000506969 1062 ntBASIC11.66□□□□□ -0.54
TRGV3P03979 COX5BP1-201ENST00000507622 393 ntBASIC11.66□□□□□ -0.54
TRGV3P03979 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.66□□□□□ -0.54
TRGV3P03979 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.66□□□□□ -0.54
TRGV3P03979 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 AP005482.1-201ENST00000563722 1273 ntBASIC11.66□□□□□ -0.54
TRGV3P03979 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.66□□□□□ -0.54
TRGV3P03979 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11.66□□□□□ -0.54
TRGV3P03979 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
TRGV3P03979 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.66□□□□□ -0.54
TRGV3P03979 MIR6805-201ENST00000615055 62 ntBASIC11.66□□□□□ -0.54
TRGV3P03979 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
TRGV3P03979 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV3P03979 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms