Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TLE1P1-201ENST00000422965 589 ntBASIC15.17■□□□□ 0.02
MT-CO1P00395 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.17■□□□□ 0.02
MT-CO1P00395 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-CO1P00395 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MT-CO1P00395 HSPB1P2-201ENST00000448722 546 ntBASIC15.17■□□□□ 0.02
MT-CO1P00395 PFN1P12-201ENST00000455938 534 ntBASIC15.17■□□□□ 0.02
MT-CO1P00395 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.17■□□□□ 0.02
MT-CO1P00395 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MT-CO1P00395 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MT-CO1P00395 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.17■□□□□ 0.02
MT-CO1P00395 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.17■□□□□ 0.02
MT-CO1P00395 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 AL118558.3-201ENST00000607414 1079 ntBASIC15.17■□□□□ 0.02
MT-CO1P00395 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
MT-CO1P00395 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 AC018735.1-201ENST00000437208 1502 ntBASIC15.17■□□□□ 0.02
MT-CO1P00395 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MT-CO1P00395 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MT-CO1P00395 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.16■□□□□ 0.02
MT-CO1P00395 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.16■□□□□ 0.02
MT-CO1P00395 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.16■□□□□ 0.02
MT-CO1P00395 AC104306.2-201ENST00000451877 341 ntBASIC15.16■□□□□ 0.02
MT-CO1P00395 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 ZNF767P-206ENST00000513792 565 ntBASIC15.16■□□□□ 0.02
MT-CO1P00395 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.16■□□□□ 0.02
MT-CO1P00395 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.16■□□□□ 0.02
MT-CO1P00395 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.16■□□□□ 0.02
MT-CO1P00395 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
MT-CO1P00395 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.16■□□□□ 0.02
MT-CO1P00395 MIR4525-201ENST00000580000 75 ntBASIC15.16■□□□□ 0.02
MT-CO1P00395 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.16■□□□□ 0.02
MT-CO1P00395 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.16■□□□□ 0.02
MT-CO1P00395 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MT-CO1P00395 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.16■□□□□ 0.02
MT-CO1P00395 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 AC007191.1-201ENST00000623179 2995 ntBASIC15.16■□□□□ 0.02
MT-CO1P00395 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 AC005912.2-201ENST00000619492 2400 ntBASIC15.16■□□□□ 0.02
MT-CO1P00395 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
MT-CO1P00395 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.16■□□□□ 0.02
MT-CO1P00395 AL390755.1-201ENST00000623716 2027 ntBASIC15.16■□□□□ 0.02
MT-CO1P00395 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MT-CO1P00395 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
MT-CO1P00395 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
MT-CO1P00395 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 LINC01230-201ENST00000625222 3017 ntBASIC15.15■□□□□ 0.02
MT-CO1P00395 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.15■□□□□ 0.02
MT-CO1P00395 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
MT-CO1P00395 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.15■□□□□ 0.02
MT-CO1P00395 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
MT-CO1P00395 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MT-CO1P00395 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.15■□□□□ 0.02
MT-CO1P00395 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.15■□□□□ 0.02
MT-CO1P00395 MIR663B-201ENST00000408361 115 ntBASIC15.15■□□□□ 0.02
MT-CO1P00395 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.15■□□□□ 0.02
MT-CO1P00395 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MT-CO1P00395 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.15■□□□□ 0.02
MT-CO1P00395 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
MT-CO1P00395 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.15■□□□□ 0.02
MT-CO1P00395 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms