Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 AC010141.1-201ENST00000411585 623 ntBASIC15.32■□□□□ 0.04
LRCH4O75427 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH4O75427 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.32■□□□□ 0.04
LRCH4O75427 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.32■□□□□ 0.04
LRCH4O75427 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.32■□□□□ 0.04
LRCH4O75427 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.32■□□□□ 0.04
LRCH4O75427 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LRCH4O75427 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH4O75427 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.32■□□□□ 0.04
LRCH4O75427 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.32■□□□□ 0.04
LRCH4O75427 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.32■□□□□ 0.04
LRCH4O75427 AC008825.2-201ENST00000603374 718 ntBASIC15.32■□□□□ 0.04
LRCH4O75427 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 AL162274.1-201ENST00000617191 1098 ntBASIC15.32■□□□□ 0.04
LRCH4O75427 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH4O75427 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH4O75427 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH4O75427 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH4O75427 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
LRCH4O75427 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LRCH4O75427 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRCH4O75427 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRCH4O75427 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH4O75427 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH4O75427 AC079776.1-201ENST00000401540 1152 ntBASIC15.31■□□□□ 0.04
LRCH4O75427 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRCH4O75427 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH4O75427 AC026954.1-201ENST00000429771 1293 ntBASIC15.31■□□□□ 0.04
LRCH4O75427 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCH4O75427 AL355994.2-201ENST00000447882 704 ntBASIC15.31■□□□□ 0.04
LRCH4O75427 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCH4O75427 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.31■□□□□ 0.04
LRCH4O75427 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.31■□□□□ 0.04
LRCH4O75427 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.31■□□□□ 0.04
LRCH4O75427 KRT17P8-201ENST00000540749 863 ntBASIC15.31■□□□□ 0.04
LRCH4O75427 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.31■□□□□ 0.04
LRCH4O75427 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH4O75427 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRCH4O75427 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCH4O75427 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCH4O75427 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LRCH4O75427 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 AC009093.10-201ENST00000641956 1442 ntBASIC15.31■□□□□ 0.04
LRCH4O75427 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LRCH4O75427 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRCH4O75427 AC011474.4-201ENST00000623523 2076 ntBASIC15.31■□□□□ 0.04
LRCH4O75427 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH4O75427 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH4O75427 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRCH4O75427 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRCH4O75427 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms