Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTNSO60931 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTNSO60931 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTNSO60931 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTNSO60931 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CTNSO60931 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CTNSO60931 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CTNSO60931 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTNSO60931 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.82□□□□□ -0.2
CTNSO60931 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTNSO60931 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CTNSO60931 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
CTNSO60931 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTNSO60931 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.81□□□□□ -0.2
CTNSO60931 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.81□□□□□ -0.2
CTNSO60931 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CTNSO60931 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CTNSO60931 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CTNSO60931 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CTNSO60931 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 MIR663B-201ENST00000408361 115 ntBASIC13.81□□□□□ -0.2
CTNSO60931 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.81□□□□□ -0.2
CTNSO60931 AL591846.1-201ENST00000451736 433 ntBASIC13.81□□□□□ -0.2
CTNSO60931 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.81□□□□□ -0.2
CTNSO60931 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CTNSO60931 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.81□□□□□ -0.2
CTNSO60931 FAM8A2P-201ENST00000528813 1142 ntBASIC13.81□□□□□ -0.2
CTNSO60931 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.81□□□□□ -0.2
CTNSO60931 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.81□□□□□ -0.2
CTNSO60931 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.81□□□□□ -0.2
CTNSO60931 MIR4783-201ENST00000580343 82 ntBASIC13.81□□□□□ -0.2
CTNSO60931 AC091271.1-201ENST00000611877 1162 ntBASIC13.81□□□□□ -0.2
CTNSO60931 MIR6074-201ENST00000612054 107 ntBASIC13.81□□□□□ -0.2
CTNSO60931 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.81□□□□□ -0.2
CTNSO60931 AL096828.3-201ENST00000615354 462 ntBASIC13.81□□□□□ -0.2
CTNSO60931 AL162426.1-201ENST00000624141 743 ntBASIC13.81□□□□□ -0.2
CTNSO60931 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTNSO60931 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTNSO60931 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTNSO60931 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.81□□□□□ -0.2
CTNSO60931 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.81□□□□□ -0.2
CTNSO60931 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CTNSO60931 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.81□□□□□ -0.2
CTNSO60931 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CTNSO60931 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
CTNSO60931 KRT8P28-201ENST00000433288 1390 ntBASIC13.81□□□□□ -0.2
CTNSO60931 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.81□□□□□ -0.2
CTNSO60931 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTNSO60931 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
CTNSO60931 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CTNSO60931 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CTNSO60931 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CTNSO60931 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CTNSO60931 REXO1L6P-201ENST00000603433 1515 ntBASIC13.8□□□□□ -0.2
CTNSO60931 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CTNSO60931 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.8□□□□□ -0.2
CTNSO60931 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 MIR1908-201ENST00000410394 80 ntBASIC13.8□□□□□ -0.2
CTNSO60931 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 ACTBP11-201ENST00000436287 1126 ntBASIC13.8□□□□□ -0.2
CTNSO60931 PFN1P12-201ENST00000455938 534 ntBASIC13.8□□□□□ -0.2
CTNSO60931 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.8□□□□□ -0.2
CTNSO60931 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.8□□□□□ -0.2
CTNSO60931 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.8□□□□□ -0.2
CTNSO60931 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.8□□□□□ -0.2
CTNSO60931 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.8□□□□□ -0.2
CTNSO60931 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.8□□□□□ -0.2
CTNSO60931 AC104982.3-201ENST00000581995 514 ntBASIC13.8□□□□□ -0.2
CTNSO60931 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CTNSO60931 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.8□□□□□ -0.2
CTNSO60931 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.8□□□□□ -0.2
CTNSO60931 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms