Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.9□□□□□ -0.02
PRAMEF11O60813 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PRAMEF11O60813 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 AC023908.3-201ENST00000564211 3047 ntBASIC14.89□□□□□ -0.03
PRAMEF11O60813 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 AC011498.7-201ENST00000624986 2027 ntBASIC14.89□□□□□ -0.03
PRAMEF11O60813 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 RPL18P13-201ENST00000478088 569 ntBASIC14.89□□□□□ -0.03
PRAMEF11O60813 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 MIR4538-201ENST00000581377 78 ntBASIC14.89□□□□□ -0.03
PRAMEF11O60813 AP000346.4-201ENST00000614827 381 ntBASIC14.89□□□□□ -0.03
PRAMEF11O60813 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.89□□□□□ -0.03
PRAMEF11O60813 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
PRAMEF11O60813 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF11O60813 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 MBLAC2-202ENST00000514906 1936 ntBASIC14.88□□□□□ -0.03
PRAMEF11O60813 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 AC144522.1-201ENST00000625111 1658 ntBASIC14.88□□□□□ -0.03
PRAMEF11O60813 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 AC126915.1-201ENST00000522847 1038 ntBASIC14.88□□□□□ -0.03
PRAMEF11O60813 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 AC005586.2-201ENST00000563946 837 ntBASIC14.88□□□□□ -0.03
PRAMEF11O60813 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 MIR6869-201ENST00000619434 62 ntBASIC14.88□□□□□ -0.03
PRAMEF11O60813 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 AC004899.1-201ENST00000424687 1714 ntBASIC14.88□□□□□ -0.03
PRAMEF11O60813 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PRAMEF11O60813 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF11O60813 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms