Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM38O00635 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM38O00635 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM38O00635 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM38O00635 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRIM38O00635 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM38O00635 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM38O00635 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM38O00635 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM38O00635 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TRIM38O00635 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM38O00635 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.92□□□□□ -0.02
TRIM38O00635 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.92□□□□□ -0.02
TRIM38O00635 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM38O00635 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM38O00635 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM38O00635 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.92□□□□□ -0.02
TRIM38O00635 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM38O00635 ENPP7P14-201ENST00000621765 1040 ntBASIC14.92□□□□□ -0.02
TRIM38O00635 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM38O00635 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 AC007787.1-201ENST00000588095 1583 ntBASIC14.92□□□□□ -0.02
TRIM38O00635 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 REXO1L2P-201ENST00000425429 2069 ntBASIC14.92□□□□□ -0.02
TRIM38O00635 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
TRIM38O00635 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRIM38O00635 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRIM38O00635 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRIM38O00635 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM38O00635 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 AL023775.1-201ENST00000454907 1746 ntBASIC14.92□□□□□ -0.02
TRIM38O00635 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 AC138028.6-201ENST00000616106 1482 ntBASIC14.91□□□□□ -0.02
TRIM38O00635 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRIM38O00635 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.91□□□□□ -0.02
TRIM38O00635 AL139094.1-201ENST00000405549 1188 ntBASIC14.91□□□□□ -0.02
TRIM38O00635 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM38O00635 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.91□□□□□ -0.02
TRIM38O00635 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM38O00635 AC005077.2-201ENST00000449786 690 ntBASIC14.91□□□□□ -0.02
TRIM38O00635 BX284668.4-201ENST00000453917 508 ntBASIC14.91□□□□□ -0.02
TRIM38O00635 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 AC091804.1-201ENST00000486888 567 ntBASIC14.91□□□□□ -0.02
TRIM38O00635 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM38O00635 SCARNA20.5-201ENST00000516991 142 ntBASIC14.91□□□□□ -0.02
TRIM38O00635 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM38O00635 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM38O00635 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRIM38O00635 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM38O00635 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM38O00635 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM38O00635 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM38O00635 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM38O00635 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM38O00635 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM38O00635 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRIM38O00635 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM38O00635 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM38O00635 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
TRIM38O00635 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM38O00635 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms