Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 HLA-DMA-203ENST00000395305 777 ntBASIC14.35□□□□□ -0.11
C4orf47A7E2U8 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 DDX39AP1-201ENST00000445147 1181 ntBASIC14.35□□□□□ -0.11
C4orf47A7E2U8 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 AL035414.1-201ENST00000451327 857 ntBASIC14.35□□□□□ -0.11
C4orf47A7E2U8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 RN7SL396P-201ENST00000471086 295 ntBASIC14.35□□□□□ -0.11
C4orf47A7E2U8 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 AC020658.6-201ENST00000623564 1870 ntBASIC14.35□□□□□ -0.11
C4orf47A7E2U8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.34□□□□□ -0.11
C4orf47A7E2U8 AL359258.3-201ENST00000622910 2331 ntBASIC14.34□□□□□ -0.11
C4orf47A7E2U8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 RNA5SP359-201ENST00000364838 113 ntBASIC14.34□□□□□ -0.11
C4orf47A7E2U8 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 AL118516.1-201ENST00000564152 670 ntBASIC14.34□□□□□ -0.11
C4orf47A7E2U8 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 AC018629.1-201ENST00000623381 1736 ntBASIC14.34□□□□□ -0.11
C4orf47A7E2U8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.34□□□□□ -0.11
C4orf47A7E2U8 CICP11-201ENST00000434745 2827 ntBASIC14.33□□□□□ -0.11
C4orf47A7E2U8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
C4orf47A7E2U8 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
C4orf47A7E2U8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
C4orf47A7E2U8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
C4orf47A7E2U8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.33□□□□□ -0.11
C4orf47A7E2U8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.33□□□□□ -0.11
C4orf47A7E2U8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
C4orf47A7E2U8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.33□□□□□ -0.11
C4orf47A7E2U8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms