Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 HSPA8P5-201ENST00000456928 2069 ntBASIC12.66□□□□□ -0.38
TMEM235A6NFC5 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 MIR574-201ENST00000385209 96 ntBASIC12.66□□□□□ -0.38
TMEM235A6NFC5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 DNAJB3-201ENST00000446806 729 ntBASIC12.66□□□□□ -0.38
TMEM235A6NFC5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 AC107373.2-201ENST00000607735 490 ntBASIC12.66□□□□□ -0.38
TMEM235A6NFC5 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 AL138799.1-201ENST00000448213 1675 ntBASIC12.66□□□□□ -0.38
TMEM235A6NFC5 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 DRD5P1-201ENST00000456605 1438 ntBASIC12.65□□□□□ -0.38
TMEM235A6NFC5 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 AL512356.2-201ENST00000546955 174 ntBASIC12.65□□□□□ -0.38
TMEM235A6NFC5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.65□□□□□ -0.38
TMEM235A6NFC5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 AC019294.4-201ENST00000561777 2905 ntBASIC12.65□□□□□ -0.38
TMEM235A6NFC5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms