Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 AC090505.1-201ENST00000430515 1834 ntBASIC14.01□□□□□ -0.17
LRIT2A6NDA9 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 AC009093.10-201ENST00000641956 1442 ntBASIC14.01□□□□□ -0.17
LRIT2A6NDA9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.01□□□□□ -0.17
LRIT2A6NDA9 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 BNIP3P42-201ENST00000454982 569 ntBASIC14.01□□□□□ -0.17
LRIT2A6NDA9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 EEF1DP1-201ENST00000585891 896 ntBASIC14.01□□□□□ -0.17
LRIT2A6NDA9 AC010328.2-201ENST00000597698 1111 ntBASIC14.01□□□□□ -0.17
LRIT2A6NDA9 BNIP3P29-201ENST00000598302 571 ntBASIC14.01□□□□□ -0.17
LRIT2A6NDA9 AC011447.5-201ENST00000616168 564 ntBASIC14.01□□□□□ -0.17
LRIT2A6NDA9 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 RN7SL832P-201ENST00000607781 1756 ntBASIC14.01□□□□□ -0.17
LRIT2A6NDA9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LRIT2A6NDA9 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
LRIT2A6NDA9 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LRIT2A6NDA9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LRIT2A6NDA9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 E2F3P2-201ENST00000447755 1422 ntBASIC14□□□□□ -0.17
LRIT2A6NDA9 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14□□□□□ -0.17
LRIT2A6NDA9 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRIT2A6NDA9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
LRIT2A6NDA9 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14□□□□□ -0.17
LRIT2A6NDA9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRIT2A6NDA9 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14□□□□□ -0.17
LRIT2A6NDA9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14□□□□□ -0.17
LRIT2A6NDA9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14□□□□□ -0.17
LRIT2A6NDA9 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 SORD2P-201ENST00000558556 1069 ntBASIC14□□□□□ -0.17
LRIT2A6NDA9 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14□□□□□ -0.17
LRIT2A6NDA9 AC132192.2-201ENST00000596206 1147 ntBASIC14□□□□□ -0.17
LRIT2A6NDA9 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14□□□□□ -0.17
LRIT2A6NDA9 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14□□□□□ -0.17
LRIT2A6NDA9 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14□□□□□ -0.17
LRIT2A6NDA9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LRIT2A6NDA9 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14□□□□□ -0.17
LRIT2A6NDA9 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 OR2I1P-209ENST00000641730 5365 ntBASIC14□□□□□ -0.17
LRIT2A6NDA9 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRIT2A6NDA9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14□□□□□ -0.17
LRIT2A6NDA9 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms