Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 AC020658.7-201ENST00000624274 2442 ntBASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AC215219.1-201ENST00000400706 1817 ntBASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AC004461.1-201ENST00000412461 403 ntBASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 KRT126P-201ENST00000549467 1181 ntBASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 MTDHP5-201ENST00000598980 586 ntBASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AC093525.8-201ENST00000624099 1342 ntBASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AL591122.2-201ENST00000624125 1853 ntBASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AC004461.2-201ENST00000629517 803 ntBASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AL513210.1-201ENST00000629608 234 ntBASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TRAV18A0A075B6X5 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 HSPA8P5-201ENST00000456928 2069 ntBASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 AL365181.3-201ENST00000605886 3222 ntBASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms