Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 AC011840.2-201ENST00000563063 1520 ntBASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 HLA-A-201ENST00000376802 1334 ntBASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 AC090643.2-201ENST00000623442 2029 ntBASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 AL662844.1-201ENST00000546340 181 ntBASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 AL079307.3-201ENST00000556114 283 ntBASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 AC007967.4-201ENST00000614700 386 ntBASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RCL1Q9Y2P8 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms