Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 AC079178.1-201ENST00000420915 656 ntBASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 RPSAP36-202ENST00000494591 1261 ntBASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 AC012617.1-204ENST00000586340 2305 ntBASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 AC215219.1-201ENST00000400706 1817 ntBASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 MTX1P1-201ENST00000440904 838 ntBASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 Z93015.1-201ENST00000451718 390 ntBASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AC132192.2-201ENST00000596206 1147 ntBASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AC009955.4-201ENST00000597192 544 ntBASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DTX4Q9Y2E6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 AC015818.8-201ENST00000587907 1519 ntBASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.65□□□□□ -0.22
DTX4Q9Y2E6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms