Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 PSMD4P1-201ENST00000433951 1109 ntBASIC14.23□□□□□ -0.13
LHX6Q9UPM6 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 HIST2H2BB-201ENST00000449108 381 ntBASIC14.23□□□□□ -0.13
LHX6Q9UPM6 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 ALG1L6P-201ENST00000515248 758 ntBASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AP003398.1-201ENST00000531124 318 ntBASIC14.23□□□□□ -0.13
LHX6Q9UPM6 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AC012557.2-201ENST00000605919 418 ntBASIC14.23□□□□□ -0.13
LHX6Q9UPM6 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AC007881.3-201ENST00000608897 607 ntBASIC14.23□□□□□ -0.13
LHX6Q9UPM6 MIR6858-201ENST00000620733 67 ntBASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AC009269.6-201ENST00000621778 588 ntBASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 KRT8P4-201ENST00000509735 1454 ntBASIC14.23□□□□□ -0.13
LHX6Q9UPM6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 AC067930.6-201ENST00000623257 4947 ntBASIC14.23□□□□□ -0.13
LHX6Q9UPM6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX6Q9UPM6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.23□□□□□ -0.13
LHX6Q9UPM6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.22□□□□□ -0.13
LHX6Q9UPM6 SEPT7P2-202ENST00000398921 823 ntBASIC14.22□□□□□ -0.13
LHX6Q9UPM6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 AC092810.1-201ENST00000429208 1224 ntBASIC14.22□□□□□ -0.13
LHX6Q9UPM6 BRI3P1-201ENST00000440440 378 ntBASIC14.22□□□□□ -0.13
LHX6Q9UPM6 AC073150.1-201ENST00000450406 1084 ntBASIC14.22□□□□□ -0.13
LHX6Q9UPM6 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 AC100850.1-201ENST00000506768 649 ntBASIC14.22□□□□□ -0.13
LHX6Q9UPM6 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 CD69-203ENST00000536709 1020 ntTSL 2 BASIC14.22□□□□□ -0.13
LHX6Q9UPM6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms