Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 AL445209.1-201ENST00000607269 3491 ntBASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 AC093724.1-201ENST00000448659 1027 ntBASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 MIR3687-2-201ENST00000577708 61 ntBASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 MIR3687-1-201ENST00000614492 61 ntBASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 AC015819.3-201ENST00000624305 2674 ntBASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBQLN2Q9UHD9 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 GHSR-202ENST00000427970 912 ntBASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 AL031432.2-201ENST00000566714 459 ntBASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 AL928711.1-201ENST00000570165 459 ntBASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 MIR4515-201ENST00000584082 81 ntBASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 MTDHP5-201ENST00000598980 586 ntBASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 AC068137.2-201ENST00000605408 478 ntBASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms