Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.76□□□□□ -0.05
SPASTQ9UBP0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 AC004945.1-201ENST00000416738 983 ntBASIC14.76□□□□□ -0.05
SPASTQ9UBP0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 AC100850.1-201ENST00000506768 649 ntBASIC14.76□□□□□ -0.05
SPASTQ9UBP0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AP000593.2-201ENST00000542775 1433 ntBASIC14.75□□□□□ -0.05
SPASTQ9UBP0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 WASH3P-207ENST00000560956 1394 ntBASIC14.75□□□□□ -0.05
SPASTQ9UBP0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AC138969.2-201ENST00000532739 9932 ntBASIC14.75□□□□□ -0.05
SPASTQ9UBP0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AL354877.1-201ENST00000424412 413 ntBASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 EIF4HP1-201ENST00000453115 687 ntBASIC14.75□□□□□ -0.05
SPASTQ9UBP0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AL451050.2-201ENST00000606967 682 ntBASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AL023803.2-201ENST00000620080 638 ntBASIC14.75□□□□□ -0.05
SPASTQ9UBP0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SPASTQ9UBP0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 REXO1L4P-201ENST00000605109 1937 ntBASIC14.74□□□□□ -0.05
SPASTQ9UBP0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 CICP23-201ENST00000605013 2741 ntBASIC14.74□□□□□ -0.05
SPASTQ9UBP0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms