Protein–RNA interactions for Protein: Q9NP64

ZCCHC17, Nucleolar protein of 40 kDa, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC17Q9NP64 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZCCHC17Q9NP64 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.27■□□□□ 0.35
ZCCHC17Q9NP64 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZCCHC17Q9NP64 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.27■□□□□ 0.35
ZCCHC17Q9NP64 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZCCHC17Q9NP64 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZCCHC17Q9NP64 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.27■□□□□ 0.35
ZCCHC17Q9NP64 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZCCHC17Q9NP64 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 AL138725.1-201ENST00000407347 1314 ntBASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 RN7SKP230-201ENST00000365642 335 ntBASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 RPL13AP19-201ENST00000434320 584 ntBASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 INE2-201ENST00000630399 1874 ntBASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.26■□□□□ 0.35
ZCCHC17Q9NP64 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 OR2K2-202ENST00000374428 1038 ntBASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 AC026320.2-201ENST00000434379 478 ntBASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 MIR3677-201ENST00000578964 60 ntBASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 AC005632.3-201ENST00000605544 308 ntBASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 AC117489.1-201ENST00000625169 3217 ntBASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
ZCCHC17Q9NP64 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.24■□□□□ 0.35
ZCCHC17Q9NP64 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.24■□□□□ 0.35
ZCCHC17Q9NP64 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
ZCCHC17Q9NP64 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZCCHC17Q9NP64 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.24■□□□□ 0.35
ZCCHC17Q9NP64 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ZCCHC17Q9NP64 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZCCHC17Q9NP64 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZCCHC17Q9NP64 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZCCHC17Q9NP64 CICP23-201ENST00000605013 2741 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms