Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 FTLP1-201ENST00000449155 526 ntBASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 AC023908.3-201ENST00000564211 3047 ntBASIC13□□□□□ -0.33
KIAA1549Q9HCM3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 RERG-205ENST00000537647 935 ntTSL 2 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 RN7SL163P-201ENST00000583100 276 ntBASIC13□□□□□ -0.33
KIAA1549Q9HCM3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 AC092506.1-202ENST00000401022 528 ntBASIC13□□□□□ -0.33
KIAA1549Q9HCM3 HNRNPA1P27-201ENST00000412087 955 ntBASIC13□□□□□ -0.33
KIAA1549Q9HCM3 XBP1P1-201ENST00000436573 652 ntBASIC13□□□□□ -0.33
KIAA1549Q9HCM3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 RN7SL67P-201ENST00000492147 296 ntBASIC13□□□□□ -0.33
KIAA1549Q9HCM3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 SPCS2P2-201ENST00000603270 608 ntBASIC13□□□□□ -0.33
KIAA1549Q9HCM3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13□□□□□ -0.33
KIAA1549Q9HCM3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms