Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 AC004461.2-201ENST00000629517 803 ntBASIC12.04□□□□□ -0.48
RAB40CQ96S21 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 AC079781.4-201ENST00000641908 219 ntBASIC12.04□□□□□ -0.48
RAB40CQ96S21 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RAB40CQ96S21 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 CICP16-201ENST00000502609 2813 ntBASIC12.04□□□□□ -0.48
RAB40CQ96S21 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 FAM90A12P-201ENST00000519497 2375 ntBASIC12.04□□□□□ -0.48
RAB40CQ96S21 FAM90A24P-201ENST00000520792 2369 ntBASIC12.04□□□□□ -0.48
RAB40CQ96S21 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB40CQ96S21 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 FAM58DP-201ENST00000428076 619 ntBASIC12.03□□□□□ -0.48
RAB40CQ96S21 CNN2P11-201ENST00000429351 262 ntBASIC12.03□□□□□ -0.48
RAB40CQ96S21 RBPMS2P1-201ENST00000437762 623 ntBASIC12.03□□□□□ -0.48
RAB40CQ96S21 AC004967.1-201ENST00000453589 447 ntBASIC12.03□□□□□ -0.48
RAB40CQ96S21 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 AL596442.2-201ENST00000610240 980 ntBASIC12.03□□□□□ -0.48
RAB40CQ96S21 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 AL158070.2-201ENST00000623713 1621 ntBASIC12.03□□□□□ -0.48
RAB40CQ96S21 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.03□□□□□ -0.48
RAB40CQ96S21 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB40CQ96S21 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB40CQ96S21 FP325330.2-201ENST00000624219 5630 ntBASIC12.02□□□□□ -0.48
RAB40CQ96S21 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB40CQ96S21 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB40CQ96S21 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms