Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 E2F3P2-201ENST00000447755 1422 ntBASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 MIR1247-201ENST00000408206 136 ntBASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 GPAA1P2-201ENST00000417923 928 ntBASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 CICP12-201ENST00000455801 843 ntBASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 SERPINA13P-202ENST00000478994 924 ntBASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 AC091804.1-201ENST00000486888 567 ntBASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 AC106794.1-201ENST00000506935 792 ntBASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 AC103810.3-201ENST00000583567 96 ntBASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 NKG7-204ENST00000595217 816 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 AL136295.7-201ENST00000619226 1200 ntBASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2E2Q96LR5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms