Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 MIR4783-201ENST00000580343 82 ntBASIC12.96□□□□□ -0.33
TMEM54Q969K7 MIR4259-201ENST00000584466 101 ntBASIC12.96□□□□□ -0.33
TMEM54Q969K7 EEF1DP1-201ENST00000585891 896 ntBASIC12.96□□□□□ -0.33
TMEM54Q969K7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 MIR6805-201ENST00000615055 62 ntBASIC12.96□□□□□ -0.33
TMEM54Q969K7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM54Q969K7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 SNX18-202ENST00000343017 3140 ntBASIC12.96□□□□□ -0.34
TMEM54Q969K7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM54Q969K7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM54Q969K7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.96□□□□□ -0.34
TMEM54Q969K7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 AC012617.1-204ENST00000586340 2305 ntBASIC12.95□□□□□ -0.34
TMEM54Q969K7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.95□□□□□ -0.34
TMEM54Q969K7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 MIR658-201ENST00000385210 100 ntBASIC12.95□□□□□ -0.34
TMEM54Q969K7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.95□□□□□ -0.34
TMEM54Q969K7 AC005586.2-201ENST00000563946 837 ntBASIC12.95□□□□□ -0.34
TMEM54Q969K7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 MIR4741-201ENST00000579822 90 ntBASIC12.95□□□□□ -0.34
TMEM54Q969K7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 GRK6P1-201ENST00000400595 1711 ntBASIC12.95□□□□□ -0.34
TMEM54Q969K7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM54Q969K7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
TMEM54Q969K7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 AC064801.2-201ENST00000625052 1303 ntBASIC12.94□□□□□ -0.34
TMEM54Q969K7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 OR8S1-201ENST00000310194 1080 ntBASIC12.94□□□□□ -0.34
TMEM54Q969K7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 AL161932.2-201ENST00000435436 679 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms