Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-CQ95604 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-CQ95604 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 AL080243.1-201ENST00000423293 1060 ntBASIC14.99□□□□□ -0.01
HLA-CQ95604 AP000244.1-201ENST00000424582 201 ntBASIC14.99□□□□□ -0.01
HLA-CQ95604 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-CQ95604 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 NRADDP-201ENST00000437305 691 ntBASIC14.99□□□□□ -0.01
HLA-CQ95604 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-CQ95604 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-CQ95604 AC092896.1-201ENST00000465850 380 ntBASIC14.99□□□□□ -0.01
HLA-CQ95604 RN7SL846P-201ENST00000467429 292 ntBASIC14.99□□□□□ -0.01
HLA-CQ95604 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-CQ95604 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-CQ95604 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-CQ95604 AC004801.1-201ENST00000549557 360 ntBASIC14.99□□□□□ -0.01
HLA-CQ95604 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-CQ95604 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.99□□□□□ -0.01
HLA-CQ95604 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-CQ95604 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-CQ95604 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.99□□□□□ -0.01
HLA-CQ95604 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-CQ95604 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
HLA-CQ95604 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-CQ95604 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-CQ95604 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HLA-CQ95604 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HLA-CQ95604 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-CQ95604 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HLA-CQ95604 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
HLA-CQ95604 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-CQ95604 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-CQ95604 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-CQ95604 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-CQ95604 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
HLA-CQ95604 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-CQ95604 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-CQ95604 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
HLA-CQ95604 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-CQ95604 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-CQ95604 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-CQ95604 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 PSAT1P2-201ENST00000426107 972 ntBASIC14.98□□□□□ -0.01
HLA-CQ95604 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-CQ95604 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-CQ95604 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-CQ95604 LINC01922-201ENST00000562582 719 ntBASIC14.98□□□□□ -0.01
HLA-CQ95604 CES1P2-201ENST00000566467 1242 ntBASIC14.98□□□□□ -0.01
HLA-CQ95604 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-CQ95604 MIR6125-201ENST00000618986 96 ntBASIC14.98□□□□□ -0.01
HLA-CQ95604 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-CQ95604 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-CQ95604 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-CQ95604 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-CQ95604 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-CQ95604 AL662844.4-201ENST00000606367 2838 ntBASIC14.98□□□□□ -0.01
HLA-CQ95604 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.97□□□□□ -0.01
HLA-CQ95604 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-CQ95604 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-CQ95604 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
HLA-CQ95604 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-CQ95604 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-CQ95604 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms