Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC22.4■■□□□ 1.18
CCNB3Q8WWL7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCNB3Q8WWL7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCNB3Q8WWL7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC22.4■■□□□ 1.18
CCNB3Q8WWL7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCNB3Q8WWL7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC22.4■■□□□ 1.18
CCNB3Q8WWL7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC22.4■■□□□ 1.18
CCNB3Q8WWL7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 ST13P19-201ENST00000442505 1124 ntBASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 CHCHD2P9-201ENST00000461726 456 ntBASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CCNB3Q8WWL7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 AC015688.4-201ENST00000580780 1647 ntBASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCNB3Q8WWL7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 FTH1P22-201ENST00000456305 520 ntBASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 TPT1P11-201ENST00000458482 498 ntBASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 AC007326.1-201ENST00000604539 458 ntBASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 AL355334.1-201ENST00000417713 215 ntBASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 AL627422.1-201ENST00000434104 580 ntBASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 RPL18AP3-201ENST00000462885 528 ntBASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 AC114947.1-202ENST00000514136 344 ntBASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCNB3Q8WWL7 AP001267.2-201ENST00000532619 2086 ntBASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 AC113367.3-201ENST00000508316 1912 ntBASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 RPL7P35-201ENST00000446943 740 ntBASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 MYADML-201ENST00000474610 2147 ntBASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 AC124068.2-201ENST00000569473 1109 ntBASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 MIR4649-201ENST00000582839 64 ntBASIC22.37■■□□□ 1.17
CCNB3Q8WWL7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 AC140479.7-201ENST00000636301 2332 ntBASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms