Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 KRT8P35-201ENST00000483942 1338 ntBASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF439Q8NDP4 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 AP001267.2-201ENST00000532619 2086 ntBASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 TPT1P11-201ENST00000458482 498 ntBASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 AL354702.1-201ENST00000442006 1960 ntBASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF439Q8NDP4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 BX640514.1-201ENST00000583223 1918 ntBASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms